Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MAVVGVPGWIGSSAVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGGAPIVFNITGNLVSYSKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGTVNGNPGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGGAVSLQNSWAPNATAGGGGGRPFGIGGGGVNWPGGNASYDAPGGAGYTSQFGGGNGGDAGGRGGDGWGNHLSRSGGGAPGRAVFGSSPSWGATGTIYGSWI |
1 | 6f45D | 0.48 | 0.46 | 13.25 | 4.09 | SPARKS-K | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTERFWISSFIGRSKEEIWEWGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVGHT-----EAGGGGGRPLGAGGVSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSASSA----EMGGGAAGRAVVGTSPQWINVGNIAGSWL |
2 | 6f45D | 0.47 | 0.44 | 12.94 | 2.53 | FFAS-3D | | -AVQG--PWVGSSYVAETGQNWASLAANELRVTEPFWISSFIGRSKEEWEWTGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGG----FRVGHTEAGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSASS----AEMGGGAAGRAVVGTSPQWINVGNIAGSWL |
3 | 6f45D | 0.49 | 0.46 | 13.35 | 10.18 | HHpred | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTRPFWISSFIGRSKEEIWETGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFR-----VGHTEAGGGGGRPLGAGGVSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSAS----SAEMGGGAAGRAVVGTSPQWINVGNIAGSWL |
4 | 6f45D | 0.49 | 0.46 | 13.35 | 3.59 | MUSTER | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTRPFWISSFIGRSKEEIWEWGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGF-----RVGHTEAGGGGGRPLGAGGSSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSAS----SAEMGGGAAGRAVVGTSPQWINVGNIAGSWL |
5 | 2x6yA | 0.11 | 0.05 | 1.82 | 0.72 | CNFpred | | --------------------QYLQAAIDYVSSNGGGTITIPA----GYTWYLGSYGVGGIAGHSGIIQL--RSNVNLNIEGRIHLSPDLKPFQVFVGF-SGNLENCHIYGHGVVDFGGYEFGA------QLRNGVAFGRSYNCSVTG-ITFQNG--------------------------------------------------------------------------------------------------------- |
6 | 6f45D | 0.49 | 0.46 | 13.35 | 5.26 | HHsearch-2 | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTRPFWISSFIGRSKEEIWETGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVG-----HTEAGGGGGRPLGAGGVSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSASS----AEMGGGAAGRAVVGTSPQWINVGNIAGSWL |
7 | 6f45D | 0.49 | 0.46 | 13.35 | 4.89 | Neff-PPAS | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTEPFWISSFIGRSKEEIWEWGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVG-----HTEAGGGGGRPLGAGGSSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSAS----SAEMGGGAAGRAVVGTSPQWINVGNIAGSWL |
8 | 6f45D | 0.49 | 0.46 | 13.35 | 7.64 | HHsearch | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTRPFWISSFIGRSKEEIWETGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVG-----HTEAGGGGGRPLGAGGVSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSASS----AEMGGGAAGRAVVGTSPQWINVGNIAGSW- |
9 | 6f45D | 0.49 | 0.46 | 13.35 | 3.00 | PROSPECTOR2 | | ---AVQGPWVGSSYVAETGQNWASLAANELRVTRPFWISSFIGRSKEEIWEWGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRV-----GHTEAGGGGGRPLGAGGVSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSASSA----EMGGGAAGRAVVGTSPQWINVGNIAGSWL |
10 | 6f45D | 0.49 | 0.46 | 13.35 | 1.94 | SAM | | ----VQGPWVGSSYVAETGQNWASLAANELRVTRPFWISSFIGRSKEEIWETGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYA--DIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFR-----VGHTEAGGGGGRPLGAGGVSLNLNGDNATLGAPGRGYQLGNDYAGNGGDVGNPGSAS----SAEMGGGAAGRAVVGTSPQWINVGNIAGSWL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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