Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LTSISAVGVAAIVATRRLLPKTASVKDKFTFIWLAFDVGIHAAFDSAFLYFSLFGRQVNTSAGPLAQLWKDYARADARWGVADPTIVSMELITVIGTGATILYIMQKLVQDDPARHYWIIVLCTAELYGGWMTFAPEWLSGSQNLNTGDAFYLWVYLFFLNTIWVFVPIWLMFDSYRYIAR |
1 | 6ohtA | 0.25 | 0.24 | 7.38 | 2.44 | MUSTER | | ILAGLFSVTGVLVVTTWLLSGR--TWRRLSLCWFAVCGFIHLVIEGWFVL---YYEDLLGDQAFLSQLWKEYAKGDSRYILGDNFT-VCETITACLWGPLSLWVVIAFLRQHPLRFILQLVVSVGQIYGDVLYFLTEHRDGFQHGELGHPLYFWFYFVF-NALWLVLPGVLVLDAVKHLTH |
2 | 5xtcr | 0.08 | 0.08 | 3.07 | 1.15 | CNFpred | | NNLMWLAYTMAFMVKMPLYGLHLWLP-PIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQT--PWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR-LPLMAFWWLLASLANLANLLGELSVLVTTFSWSN |
3 | 2pffB | 0.17 | 0.17 | 5.43 | 1.06 | HHsearch-2 | | LLVPTASFFIASQLQEQFEPSKVGQFDQVLNLCL------T-EFENCYLEGNDILQENDTTLVKTKELIKNYINAQLVAIFTDD--YFEELRDLYVFSAETLSELIRTTLDTPISCPLIIQLAHYVVTAKLLGFTPGELRSYLGTGHSQGLVTWESFFVSVRKAITVLFFIGVRCYEAYPN |
4 | 6ohtA | 0.25 | 0.24 | 7.52 | 3.03 | Neff-PPAS | | ILAGLFSVTGVLVVTTWLLSGR--TWRRLSLCWFAVCGFIHLVIEGWFVLYY---EDLLGDQAFLSQLWKEYAKGDSRYILGDNFTVC-ETITACLWGPLSLWVVIAFLRQHPLRFILQLVVSVGQIYGDVLYFLTEHRDGFQHGELGHPLYFWFYFVF-NALWLVLPGVLVLDAVKHLTH |
5 | 6ohtA | 0.23 | 0.22 | 6.94 | 3.57 | FFAS03 | | WHILAGLFSVTGVLVVTTWLLSGRTWRRLSLCWFAVCGFIHLVIEGWFVL---YYEDLLGDQAFLSQLWKEYAKGDSRYILGDNFTV-CETITACLWGPLSLWVVIAFLRQHPLRFILQLVVSVGQIYGDVLYFLTEHRDGFQHGELGHPLYFWFYFV-FNALWLVLPGVLVLDAVKHLTH |
6 | 2yevA | 0.12 | 0.10 | 3.73 | 1.11 | CNFpred | | LTGFGNFVVPLMLGARDVA---LPRVNAFSYWAFLGAIVLALM-SVGWTFYYPFSAQSES-GVDFYLAAILLLGFSS-------LLGNANFVATIYNLR-MPIYVWSVF-----AASVLNLFSLAGLTAATLLVLLERKIGLSWFNGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS |
7 | 3rlbA | 0.09 | 0.08 | 2.96 | 0.99 | SPARKS-K | | LTEIAFMAALAFIISLIPNTVYVEIACIPILLLSLRRLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYL-----------------------VAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFPK |
8 | 6nf6A1 | 0.07 | 0.07 | 2.79 | 0.79 | FFAS-3D | | FSGLLAVVFLGSAFISSMIFNHVAITLADVWILLSILKVLCLCWIIYYLLGTSRQPHAVAPVWIFGTFSILLNVFQGYSVIQINCKSKVEIVFPSIEILFVATQAFFLWHHSRCGLMLTIATNLLLWLLAVTNDIHMEIESQLRTTTCKVFQKGYILLYPFNTYCLICCSVLYVMWKNVGR |
9 | 3fbvK2 | 0.17 | 0.04 | 1.28 | 0.23 | HHpred | | --------------------------------------------------------------------------------------------------------------------------NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCILSHPF----------------- |
10 | 5kbwA | 0.08 | 0.07 | 2.80 | 0.89 | MUSTER | | ISFVGIFSALATLVMFLEFPIFPQASFLKYDPSEIPALIVSFLL-MFVVLVKDILFFLMKSGD------------------------PVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFATAFALGLNALIVYFEAPFELYLKFFPFILAFNLVKFGIDSVVTFFVYKKVSS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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