Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | LGLFVVAYILGCGFAQSLAIVPGTGISIWPPSGLFIATLVLASGYSWPWWVLGGCLAELFSNFLWFHSPLPAAVLIYIGNALEAAVGAWLVNRTCRRPVRLETLQEVLAFVVLAAGVAPTIGATVGSATLAWFGIQSQTFAAAWPLWWIGDATGILIVAPLALVVFQNWRGKSQLSAARWMEACVLGLIFLGVAALSLSGYLPFAYIIMPPLLWAAARFEFRGAAVALTLLALITAVFTISGASQFAGDPESQKHKQIMLQLFLAISAFSALIVAAISRQH |
1 | 6oh2A | 0.09 | 0.08 | 2.99 | 1.13 | SPARKS-K | | LTVMTLVAAAYTVALRYTRTTAEELYF---STTAVCITEVIKLLISVGLLAKETRFKASLSENVELAKLSVPSLVYAVQNNMAFLALSNL------------DAAVYQVTYQLKIPCTALCTVLML------NRTLSKLQWISVFMLCGGVTLVQVLCSGFAGVYFEKVLKSSDTSL-WVRNIQMYLSGIVVTLAGTYLSDWFVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVG----LQIT------LSFALGALLVCVSIYLYGLPR-- |
2 | 3m71A | 0.13 | 0.12 | 4.20 | 1.27 | FFAS-3D | | -GYFGIPLGLAA-LSLAWFHLENLFDVLGIVASAVWILFILMSPVRFSFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLFSTLRVSELWQGGVF--EQKSTHPSFYLPAVAANFTSASSLALL--------GYHDLGYLFFGAG-MIAWIIFEPVLLQHLRISSLEPQFRATMGIVLAPAFVCVSAYLSINHGEVDTLAKILWGYGFLQLFGLNIGLWAFSFGLASMANSATAF-----YHGNVLQGVSIFAFVFSNVMIGLLVLMTIYKLTKGQ |
3 | 5y78A | 0.09 | 0.09 | 3.23 | 1.00 | MUSTER | | FFLWYFFNFIFNIANKRTLNMWKYPWVLLGVGALYCTFLWVLGLKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHAATELTFTWTGFITAMISNVAFVTRNITSKFTMVFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYN-----EVSYLCLDNV------SPVSFSIGNTIKRVIIIFGSIL----VFRTPVT------RLNFIGSTIAIIGTMLYSLAKAK |
4 | 3rkoB | 0.12 | 0.12 | 4.23 | 1.45 | CNFpred | | LSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLDNLLLMYLGWEGVGLCSYLLIGGAAAMKAFVVTRVGDVFLAFALFILYNEL-GTLNFREMVEMLMWATLMLLGGAVGKSAQLPLQTWLADAMGPTPVSALIHAATMVTAGVYLIARTHGLFLMT------PEVLHLVGIVGAVTLLLAGFAALVQRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC--KSIPLVYLCFLVGGAALSALPTAGFFSKD |
5 | 6eznF1 | 0.10 | 0.10 | 3.78 | 1.17 | Neff-PPAS | | --LYPGLMTTSAFIWHALRNWLGLAPLFSGVTAWATYEFTKEIKDASAGLLAAGFIAIVPGYISRSVAGSYDNEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDPVSWPAFFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTA |
6 | 5y78A | 0.07 | 0.06 | 2.64 | 1.16 | PROSPECTOR2 | | FFLWYFFNFIFNIANKRTLNMWKYPWVLLGVGALYCTFLWVLGLRLIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIA---QNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFY-----------HLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSIFRTPV----------TRLNFIGSTIAIIGTMLYSLAKAKLP |
7 | 3ayfA2 | 0.11 | 0.10 | 3.76 | 1.13 | SPARKS-K | | VSALFFVQTMFGALLAHYYTEPDSLAIFWIATAWLGMGIFIAPLVGFWALVVLVGGSMIGQWLGVNGLGRIWQIILVVGMLLWLFIVFRGVKRGLKRESDKGG---LIHLLFYSAIAVPFFYIFAFFI-----QPDTNFTMADFWRWWIIHIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHSPEVWIALGAVFSALVIPLTLLYKMMRDATFWFLISTAIWNLVGAGVFGFLINLPAVSYFEAHGHAAMMGVYGMFAIAVLLYS |
8 | 5y78A | 0.13 | 0.11 | 3.98 | 1.26 | FFAS-3D | | VGFYFFLWYFFNFIFNIANK--RTLNMWKYPWVLSTIQLGVGALKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVL---GEFFHPLTYLTLVPIVSGVALSAAFITAMISNVAFVTRNITSKFTMVAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFY-----------HLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVT----------RLNFIGSTIAIIGTMLYSLAKAK |
9 | 4he8F | 0.12 | 0.12 | 4.15 | 1.41 | CNFpred | | LLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLDSYPVMFIGWEGVGLASFLLIGFWYADSARKAFIVNRIGDLGFMLGMAILWALYGTLS-NPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMGPTPVSALIHAATMVTAGVYLIARSSFLYSVL-----PDVSYAIAVVGLLTAAYGALSAFGQTKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAL-LPQTRWHALIGALALGGLLSGFWSKDAILA |
10 | 5ezmA1 | 0.12 | 0.11 | 3.86 | 1.16 | Neff-PPAS | | ----PFHMWVTVVGYELFGLGEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPERRSGSVF---------------YFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSK----------LPGYIVPVIPALGILAGVALDRL---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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