>PF05112 (308 residues) EHTTQFLPQACKLEDEVLVLYAIYLNGFDYTLPRFVKREVQVNADGFVRFDYNIKIFDFA RFTNMTQATPEDIDDYINLTRIDSLSDHDLKMLHLVCRDRWYKGDVARLRRILQQKDVDD LVKFVCNVMWERAYEDHYTLGQQLSIRITTKLIQSGLDFKHQPDTTAPVSVRGWEDATFE KYLQSITSISEVIKRHVFSKKYICLEVAASYWSDAVELLQQENFKIILNSKTPYVLLIEM DDDKNSMMYLRKLAHLLENKIVNLLFVTDVEFYFKNGNFIFYLYNSLKFYYYCLKNKFAF ENVDKEIF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EHTTQFLPQACKLEDEVLVLYAIYLNGFDYTLPRFVKREVQVNADGFVRFDYNIKIFDFARFTNMTQATPEDIDDYINLTRIDSLSDHDLKMLHLVCRDRWYKGDVARLRRILQQKDVDDLVKFVCNVMWERAYEDHYTLGQQLSIRITTKLIQSGLDFKHQPDTTAPVSVRGWEDATFEKYLQSITSISEVIKRHVFSKKYICLEVAASYWSDAVELLQQENFKIILNSKTPYVLLIEMDDDKNSMMYLRKLAHLLENKIVNLLFVTDVEFYFKNGNFIFYLYNSLKFYYYCLKNKFAFENVDKEIF | |||||||||||||||||||
1 | 4bg2A | 0.12 | 0.09 | 3.33 | 0.68 | SPARKS-K | NQRKDRRLQFVRTHQEALPLFEEAILEI--EGSCSVESSCQVEGD---RLQGGRYEVCNNQGTTWPES-LTHAFKLLDKIDSQLGVRINRDSFDRFAAAHV------------NSRKIINNT---------------------IGVHLGSKLEDSSVLY-IHIKPEED------TEELARTALVLDGGLTRVLLRDTVGRSRVDLGPCAPKGKHLEQYTQKNLFGAFFSKTREPILFFYHSIIKDLPKYGDKIYNFCQSQCITDVAIAVTETELEKENFCFYYDQWDEC------------------- | |||||||||||||
2 | 6cn7A | 0.10 | 0.09 | 3.45 | 0.61 | FFAS-3D | -MNHKDWDFVNRQLVAKMLAELEYEQVFHA----------ESQGDGRYCINLPGAQWRFS----AERGIWGWLWIDAQTLRCADEPVLAQTLLMQLKPV--LSMSDATVAEHM-----QDLYATLLGDLQLLKARRGLSASDLIDLDADRQCLLSGHPK-FAFNKGRR----GWGKEALERYAQEFARFNQVWQDNGLDNDWLPLPVHPWQWQQKIADLAEGRMLWLAQQSLRTLTNIKLPYPGKYIAAGPLASRWLQQEMLGVIWRENPCRWLKPDESPILFRVVVVPLYHLLQNITLVLLKDFQ-- | |||||||||||||
3 | 2pz0B | 0.13 | 0.07 | 2.37 | 0.31 | HHpred | ---SKNVPE------NTIAAFKRMELGAD-----GIELDVQLTKDGHLV------VIHDETVDRTTNGEG----------FVKDFTLEEIKK----------------------------------------------------------------LDA------------GIKFGEKFA--GERIPTLYEVFELIGDKDFLVNIEIKSGIEEKLIKAIKEYN-------FEERVIISSFNH--YSLRDVKKMAP-----HLKIGLLYQCWHMALRMEASLHPF------------------------ | |||||||||||||
4 | 5nvrA | 0.15 | 0.14 | 4.81 | 0.64 | MUSTER | KREYDKI-QAVEVAILAHDLILTSLKHLDRKDQTHLESFSSLFRDFFGAVTSSFVTFLDLFLRKNDS----SLVNFNIQISKGISQGNTLDLLKDVIRKA-ETSEFLIIEKFLELDD-KKTEVYAQNWVGSTLLPPNISLANIVNKVPNENSIENFLDLKLSFPVNLFTLLHSWSNNNFIYFIQSYVSKNE-LNVDLITLLKTSLPGNPELFSGLLPFLRRNKFDILEYCIHSNPNLLNSIPDLNSDLLLKRASYFAANCSEQLTL---VRWLLKGQQLEQ-LNQNFSEIENVLQNAS--SELEKSEI | |||||||||||||
5 | 4a15A | 0.12 | 0.10 | 3.41 | 0.68 | CNFpred | ------FYDYGERN--NVCPYESMKAA---------------------LPDADIVIAPYAYFL-----NRSVAEKFLSHWGVIVII-NLPDIGRSIGSFRISVESLNRADREAQA-HVSDLIEMIRSALQSMVSERCGKGDVRIRFQEFMEYMRIMN---------------KRSEREIRSLLNYLYLFGEYVENEKEKVGKVPFSYCSSVASRIIAFSDQDKYAAILSPDGGYMQAACLD----PSGILEVLK------ESKTIHMSGTLDPF------DFYSDITGFEIPFKKIGEIFPPENRYIA | |||||||||||||
6 | 2pffB | 0.20 | 0.18 | 5.83 | 0.88 | HHsearch-2 | AYSTRPLTLSHVLLVPTAS-FFIASQLQEQF-----NKILPEPTEGFAADDESLVQFDQLCLTEFENCEGNDIALAAKLLQENTTLVKTKELIKNYITARIMADYFEELRDLYQTYHVGDLIKFSAETLSERTTLDAEVFTYLLSIPISCPLIQLGFTLKGATGHSQIAETDSWESF-FVSVRKAITVLFFI--GVRCYEAYPNTSLPPSILEDSLENN-EG--------VPSPML--SISNTQEQVQYVNKTNHLPAGKQVEISVVSGPNLTLRKAKAPSGLDQSRIPFS---ERKLKFSNRFLPVA | |||||||||||||
7 | 4gyoA | 0.05 | 0.05 | 2.14 | 0.61 | Neff-PPAS | EDMEENQDLLLYFSLMEFRHRIMLDKLMPVKPFSDMLNEIESNLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMNYASQELYGRRRVQCEFIIAGNLTDVYH---HEKALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQQAVQAVVEAYDRGIKSAAEW-------------------EDDMYLTKFRLIHELYLGSGDLNVLTECFDLLESRQLLADAEDLLHDTAERFNQLE------HYESA | |||||||||||||
8 | 4uzzB | 0.23 | 0.04 | 1.32 | 0.39 | HHsearch | ------------------------------------------ASDEF-----ASEKVRLAQLTN--KCNNNDLDYYIKESGDIGVTDDAKAILRYVLEELFKKLN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2ox4C | 0.11 | 0.09 | 3.37 | 0.68 | SP3 | ---------------SKIEIFHVHTRPQSGQRPILVK--VST-DEGIYGLGEAG-----IAYGVGGSAAAGILKDYAALLIGEDPFNTEAIWEKLFKKTFWGLN--LPVYKLLGGKNREDLRVYA--SQLQFGWGKEKGRKEEY-AEEALKAVAEGYDLAHDRNGSREGVFLEGPLETIKIGVERVEAIRNAVG----PDVDIIVETDLVSAIQFAKAIEEFNIFFYEKKKID--IPLASGE---RIYSRWGFLPFLEDRSIDVIQP-DL-------GTCGGFTEFKKIADMAHIF-------EVTVQ | |||||||||||||
10 | 5wc6M | 0.08 | 0.08 | 3.03 | 0.84 | PROSPECTOR2 | FLKFHLAEDQYQGLIEKLLMPKNIAERCNKELFNSIRFLCLPKSPM---------RLNIKNYIMM----LNSYKLLLKRIKPKSFERHYSLLGTLAKNMGYKYSSMQEACKKLDDSMEKKVYKKISKSFIYKNIRSSLKPFDSFDHIYVAFPEKVKNVFKCNKISFFSIYESRLENEHVSEFI----------RNNKCSKKNIIFEYISTILDILYKYAKEYKTKVFISKDKQGLIIME-NISFPAEDFISQVYTTLISKDIKAISIYPRKEVLKKIEYKEEYFKDIESHYSLLSKDGIRILNNTNEI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |