>PF05090 (428 residues) VFRIQFGILMFWSIIRFAANGWISKLYIEPQFFFSYYGFEWVQPLGEWTYLIFIICGLAS LFVAIGFKYRWAIIIFFLSFTYIELMDKTTYLNHYYFISILSFLMIFLPAHCYFSVDAWQ DEKIRSQKVPSWTIDSIKLLLGIVYFYAGLAKLNSDWLFEAMPLQIWLPAKYSIPLLGDL LQQTWMHYIFAWSGAIYDLSIPFLLLYKRTKPFAFILVVVFHVMTRVLFPIGMFPYIMIA SALIFFDSALHNKILEKLSEWLRISKSYFDNGAVYEFPKTWLRNASMGIISAFFILQLLI PFRYLLYPGELFWTEEGYRFSWRVMLMEKAGYANFKVVDPENDQRFYVDNTQFLTRFQEK QMSSQPDFILEYAHFLEDHYQEQGIKDPEIYAESYVALNGRRSQPYVDPNVDLTEIEPSF KHRTWLLP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VFRIQFGILMFWSIIRFAANGWISKLYIEPQFFFSYYGFEWVQPLGEWTYLIFIICGLASLFVAIGFKYRWAIIIFFLSFTYIELMDKTTYLNHYYFISILSFLMIFLPAHCYFSVDAWQDEKIRSQKVPSWTIDSIKLLLGIVYFYAGLAKLNSDWLFEAMPLQIWLPAKYSIPLLGDLLQQTWMHYIFAWSGAIYDLSIPFLLLYKRTKPFAFILVVVFHVMTRVLFPIGMFPYIMIASALIFFDSALHNKILEKLSEWLRISKSYFDNGAVYEFPKTWLRNASMGIISAFFILQLLIPFRYLLYPGELFWTEEGYRFSWRVMLMEKAGYANFKVVDPENDQRFYVDNTQFLTRFQEKQMSSQPDFILEYAHFLEDHYQEQGIKDPEIYAESYVALNGRRSQPYVDPNVDLTEIEPSFKHRTWLLP | |||||||||||||||||||
1 | 5ezmA | 0.10 | 0.10 | 3.52 | 1.29 | SPARKS-K | LVGPDEGRYAEISREMFASGDWVTIRYNALKYFEKPPFHMWVTGLGEWQALAVALSGLLGIGVSMMWFGARAAAFTGLALLAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQ-------HPDASVAACWAAMGVAILTKPGLVLVVYTLVTRDWGLWRRLITVPWFYLVSVRNPEFPNFFFIHLPLVIGGFLPWAGIFPKLWTAMRRFRPALMAGIWAIAIFVFFSGYIVPVIPALGILAGVALDRGKQLIGMAIVAACGLLASPVVATLNALLRRGVLPSVAVYAMGMYLGFTVALLGHETVGLTPEMPLYGVQMLDHTLPFYLRHP-----LMMVGQ-------ADELTFGATVEPQRVVPDV-------DSFTKLWKNG--QPAMAVMSPDTYLALAPTLSMYVVARDWRRVVVANVASLAGPQ | |||||||||||||
2 | 6eznF | 0.11 | 0.10 | 3.56 | 1.21 | MUSTER | LFAPLFSGVTAWATYEFTKEDASAGLLA---VPGYISRSVAGSYDNEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFYMVSA-WGGYV----FITNLIPLHVFLL--------ILMGRYSSKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTSWPAFFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMVLMLTLTPVICVSAA--VALSKIFD--------IYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIWSKVAAWWDYGYQIGGM---ADRTTLVDNNTW-NNTHIAIVG---KAMASPEEKSYEILKEHDVD----YVLVIFGGLIGFGGDDINKFLWMIIWPEEIKERDFYTA | |||||||||||||
3 | 3eh3A | 0.10 | 0.09 | 3.18 | 1.39 | CNFpred | LALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVNAIVFTQLFAQAIMVYLPARELN-GLMWLSWWMAFIGLVVAALPL-KGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPWGVDPLVA------RTLFWWTGHPIVYFWLLPAYAIIYTILPKQAGRLVSDPMARLAFLLFLLLSTPVGFHHQKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGG-----LFGWIRALPDNPAFVAPVLGLLGFIPGGAGGIVNVHNTAWVPGLQVASLVTLTAMGSLYWLLPNLT-------GKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLLN--------------------------------------------- | |||||||||||||
4 | 3wajA1 | 0.07 | 0.06 | 2.55 | 1.31 | Neff-PPAS | RAAVIAAFLIAIVPGQFLQRSILGFNDHHIWEAFWQVSALGTDLTARQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGALFFFGMAGILYSAKRRSFPEMALLIWAIAMFIALWGQNRFAYYFAAVSAVYSALALSVVFDKL--------------------HFRVAFALLIALAAIYPTYILADAQSSYAGGPNKQWYDALTWMRENT-----PDGEKYDEYYLQLYPTPQSNKEPFSYPFETYGVISWWDYGHWIEAVAHRMPIANPFQA----------------------------------------- | |||||||||||||
5 | 5ezmA | 0.06 | 0.06 | 2.45 | 1.44 | PROSPECTOR2 | ATGWVVLFVAVALVVWFVSLDMREMFASGDWVTIRYNALKYFEKPPFHMWVTVVGYLGIGVSMMAARRWRAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAF-------MLMGQHPDASVAARRGWMVACVGIALPGLVLVVYTLVTRDWSVRNPEFPNFFFIHEHWQRRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRVPVIPALGILAGVALLSPRSWGKQLIGMALASPVVATLNANHIPNSFYRAYAVWVAVAVAVYAMGMYLGFTVALLGHE--TVGRPASGADIAPQIAQKLTPEMPLYGVQMLDHPLMMVGQADELTFGATVEPQRVVPDVDSFTKLWKNYLALAPTLSMYVVAR--------------DWRRVVVANVASLAGP----Q | |||||||||||||
6 | 3ayfA2 | 0.11 | 0.08 | 2.86 | 1.10 | SPARKS-K | FWALVVLVGGSMIGQWLGVNEWFLLG---------HQGWEYIELGRIWQIILVVGMLLWLFIVFRGDKGGLIHLLFYSAIAVPFFYIFAFFTMADFWRWWIIVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHSPEVWIALGAVFSALEVIPLTLLEQYKMMRDGKATFWFLISTAIWNLVAGVFGFLINLPAVSYFELTPAHGHAAMMGVYGMFAIAVLLYSLRNIVVITLLPVGILQMKEAFIHPSFLQQDVVQNLLLVRAVPDTIFLIGVVALLVFAIKALFHLRKPTHGEGEE---------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5ezmA | 0.07 | 0.06 | 2.44 | 1.32 | CNFpred | --DEGRYAEISREMFASG--DWVTIRYNALKYFEKPPFHMWVT-GEWQARLAVALSGLLGIGVSMMAARRAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAF----MLMGQHPDASVAARRGWMVACWAAMGVAILTKVGIALPGLVLVVYTLVTRDWGLWRRLHLLGVVVMLVITVPWFYLVS-FLPLVIGGFLPWAGI-RPALMAGIWAIAIFVFFSISR-IVPVIPALGILAGVALDRLRSWGKQLIGMAIVAACG-TLNANHIPNSFRRGVLPSVAVYAMGMYLGFTVALLGHETVG-RPASGADIAPQI-MPLYGVQM-LDHTLPFYL---HPLMMVGQAD----ELTFGATVEPQRVVPDVDSFTKLWKNG--QPAMAVMSP---------------------------------- | |||||||||||||
8 | 5ezmA | 0.08 | 0.07 | 2.78 | 1.25 | Neff-PPAS | VVWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTIRYNALKYFGEWQARLAVALSGLLGIGVSMMFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQH------------PDASVAARRGWMVACWAAMGVAILTKGDWGLWRRLVPWFYLVSVRNPEFPNFFFIHYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISVPVIPALGILAGVALDRGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRG---------------------------------VLPSVAVYAMGMYLGFTVALLGHETVGRPASADIAPQIAQKLTPEMPLYGVQMLDHTRHPLMMV--GQADELTFGATVEPQRVVPD | |||||||||||||
9 | 6eznF | 0.08 | 0.08 | 3.20 | 1.42 | PROSPECTOR2 | SKLVIFPWFNYRATKYLVNNSFYKFLNWFDDRTWYPLGRVTGGTLYPGLMTTSPLFSGVTAWATYEFTKEIITLLMVTFMFWIKAQKTGSWGGYVFITNLIPLHVFLLILMGRYSSKLYSVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVSWPAFFFDTHFLIWLFPAGVLKDEHVFVIAYSVLCSYFAMLTLTP-----VICVSAAVALSKIFDIYLDFKLLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIDDFREAYYWLAAWWDYGYQIGGMADRTTLVDNNTWNNTHIAIVGKAMASPEHDVDYVLVIFGGLIGFGGDDINKFLWMIRISEYRVDARASETMRNSLLYKMSYKDFPQLFNGGQATDRVRQQMITPLDVPPLDYKTRRSIKRPELGLRV | |||||||||||||
10 | 6eznF | 0.10 | 0.10 | 3.52 | 1.09 | SPARKS-K | SIIHEFDPWFNYRATKYLVNNSFYKFLWFDDRTWYPLGRTGGTLYPGLMTTSAFIWHALRNRNVCVL---FAPLFSGVTAWATYEFTKEIK--DASAGLLAAGFIAIVPGYISRSVAGSYD-----NEAIA-----ITLLMVTFMFWIKAQKTGSHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILLYSAYTTWYAIGTVASMAALGVFGLIQIVAFGDFVKPAFFFDWLFPAGVFLLFHVFVIAYSVLCSYFAGVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQT---------KLALIDYYWLRMNSDEDSKVAAWWDYGYQIGGMATWNNTHIAIVGKAMYEILKEHDVD----YVLVIFGGLIGFGGDDINKFLWMIIWPEEIKERDFYTA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |