Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FKVDYNQVSEFEEFKKGEYEVTVVGYEMTQAKTGSNMVVLTYEVRSDVEQPCKGQKINYDNFVVSDKSMWRFHALSKAVGVPEGTPFESYTEWAKTMQNKPLRVVVGLREQNGRNYPQVNGFKPSEVGKP |
1 | 1ptoE | 0.11 | 0.08 | 3.08 | 0.97 | SPARKS-K | | ----------DVPYVLVKTNMVVTSVAMKPYEVTTRMLVCGIAAKLGAAASSPDAHVPFCFGKDLKR--------------PGSSP---MEVMLRAVFQRPLRMFLGPKQLEGKPALELIRMVECSGKQD |
2 | 4lesA | 0.14 | 0.12 | 3.92 | 0.54 | FFAS-3D | | -----------KDFHTPKFDVTVKRVVERDKEDGHVFIVVEAEGKNITSEPKLPSVDLVDENDNAYQSDVWAASSYDVEKGETSSITKELKPGKEKFDTGKWYVVV-----NNEYKEQIK---------- |
3 | 6i52C | 0.11 | 0.08 | 3.04 | 0.28 | HHpred | | -------------QPDGTWRCEKC---DTNNARPNWRYILTISIIDE---T--N-QLWLT--LFDDQAKNTLMSLK---E-E---DPNEFTKITQSIQMNEYDFRIRARTYNDQIRYTVANLHSLNYRA- |
4 | 3osqA | 0.09 | 0.09 | 3.49 | 0.67 | MUSTER | | FKYENHLSHNVYIMAQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVDNHYLSTQSKLSEKRDHMVLLEFVTAAGITLGMDELYSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKL |
5 | 4gnxC | 0.07 | 0.05 | 2.24 | 0.71 | CNFpred | | ----------------NNWRCEKCDRSYAT---PEYRYILSTNVADA------TGQMWLSGF--NEDATQLIGMSAGELHKLREESESEFSAALHRAANRMYMFNCRAKM-TARVRYTISRAAPVDFAKA |
6 | 3v9fA | 0.12 | 0.12 | 4.07 | 0.55 | HHsearch-2 | | EYLDIATFTTVPALPSEQTWTATEAEDIGHVEGGKSVKHFVRCIYKD----TNG-NIWIGQWLATGEGLVDYQVFQRKEGLPNTKCFYTYDH-SNNIPQGSFISGCVTKDHNGLIYNGLCFFNPDIAIPP |
7 | 2llgA | 0.12 | 0.12 | 4.06 | 0.80 | Neff-PPAS | | -EVLATSIGTYETLLVPDGRLALTALHKGKDYQGKPMFYVLFELTNTTEKTQNIQLMIQSFMEVSQTVHGKAQNL-QYAVLTDSPFQDKLDRLADEINNKPVHFKFRDRLLSLDEPIASEEITIT----- |
8 | 3v9fA3 | 0.16 | 0.05 | 1.80 | 0.60 | HHsearch | | LENSWYTIVTFRNIPPGKYEFLVKARLHNQ-DWSEDTTSLRIHINP------------------------------------------------------------------------------------ |
9 | 3f2bA1 | 0.14 | 0.11 | 3.68 | 0.78 | SP3 | | -VRRLETIVEEER--RVVVQGYVFDAEVSELKSGR--TLLTMKITDYTN------SILVKMFSRDKEDAELMSGV------KKGMWV-------------KVRGSVQNDTFVRDLVIIANDLNEIAANER |
10 | 2k5vA | 0.08 | 0.05 | 2.16 | 0.56 | PROSPECTOR2 | | MNYKISELM-----PNLSGTINAYPKKEFSRKDGTKGQLKSLFLKDD------TGSIRGTLW---------------------------NELADFEVKGDIAEVSGYVKQGYSGLEISVDNIGIIEKSLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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