Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VKQSALDDGLDKLHGKIPRGRDKMCRHGPKGMCDYCQPMDPFDPGYMADKKIKYTSFHSHLRKVNAFTNKPELGSSYIPPLVEPYYRVRRDCPTGHPPWPEGVCSKCQPSAITLNPQSFRMVDHVEFASPSIVDSFIDPWRKTG |
1 | 6cddA | 0.74 | 0.74 | 21.06 | 6.38 | SPARKS-K | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
2 | 6cddA1 | 0.74 | 0.74 | 21.06 | 2.95 | FFAS-3D | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
3 | 6cddA | 0.74 | 0.74 | 21.06 | 8.06 | HHpred | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
4 | 6cddA1 | 0.74 | 0.74 | 21.06 | 2.16 | MUSTER | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
5 | 6cddA | 0.74 | 0.74 | 21.06 | 4.83 | CNFpred | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
6 | 6cddA | 0.74 | 0.74 | 21.06 | 4.54 | HHsearch-2 | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
7 | 6cddA1 | 0.74 | 0.74 | 20.87 | 3.01 | Neff-PPAS | | -RQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
8 | 6cddA1 | 0.74 | 0.74 | 20.87 | 6.90 | HHsearch | | VRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRT- |
9 | 6cddA1 | 0.74 | 0.74 | 20.88 | 2.11 | PROSPECTOR2 | | IRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
10 | 6cddA | 0.74 | 0.74 | 20.87 | 2.21 | SAM | | -RQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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