Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MYRQSYQRGVFSIFYSVGSKPLALWDTVTRDGYITKFLDEDIKSTVLEIGGTNVSTTYMICPKGNAVLGICMPFLVMIVKNLRKYFSFEVTILDETGTRRRFRVSNFQSQTQILPLCTVMPIGLSEGWNQIQFNLAEFTRRAYKKQFIEVQKVKINANIRLRRIYFAERLIPEDQLPAEYKLF |
1 | 4pw2A2 | 0.10 | 0.09 | 3.20 | 1.29 | SPARKS-K | | --------RPPHVEVYDTAEERSAWTVP-KGCSLTRVYDKTRATSVREFSAPESEGVSLPLGNTK------DFIISFDLKFSNGSVSVILETTEKGPP-FVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIKTMPRRVVKLVVHGTGTIDNITISTT-------------- |
2 | 4pw2A2 | 0.11 | 0.09 | 3.36 | 1.06 | FFAS-3D | | ------RPPHVEVYD--TAEERSAWTV-PKGCSLTRVYDKTRATSVREFSAPENSEGVSLPLGNTKDF-----IISFDLKFTSNGSVSVILETTEKGPPFVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIGLSPRRVVKLVVHGTGTIDNITISTT-------------- |
3 | 4pw2A | 0.14 | 0.10 | 3.56 | 1.59 | CNFpred | | ----------------------SAWTVPK-GCSLTRVYDKTRATSVREFSAPNSEGVSLPLGN------TKDFIISFDLKFT-SNGSVSVILETTEGPPFVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIKTMPRRVVKLVVHGTGTIDNITIST--------------- |
4 | 4pw2A2 | 0.10 | 0.09 | 3.20 | 1.46 | HHsearch-2 | | ------RPPHVEVYDTA-EER-SAWTVPK-GCSLTRVYDKTRATSVREFSAPENSEVSLPLGNT------KDFIISFDLKFTNGSVSVILETTEKGP-PFVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIGSMPRRVVKLVVHGTGTIDNITISTT-------------- |
5 | 4pw2A2 | 0.11 | 0.09 | 3.13 | 1.30 | Neff-PPAS | | ----------------------SAWTV-PKGCSLTRVYDKTRATSVREFSAPENSEGVSLPLGNTK-----DFIISFDLKFTSNSVSVILETTEKGPP-FVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIGLMPRRVVKLVVHGTGTIDNITISTT-------------- |
6 | 4pw2A2 | 0.10 | 0.09 | 3.20 | 1.58 | HHsearch | | ------RPPHVEVYDTA-EER-SAWTVPK-GCSLTRVYDKTRATSVREFSAPENSGVSLPLGNT------KDFIISFDLKFTNGSVSVILETTEKGP-PFVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIGSMPRRVVKLVVHGTGTIDNITISTT-------------- |
7 | 4pw2A | 0.11 | 0.10 | 3.58 | 1.01 | SPARKS-K | | HYSKNLTERPPHVEVYDTAEERSAWTVP-KGCSLTRVYDKTRATSVREFSAPESEGVSLPLGNTK------DFIISFDLKFSNGSVSVILETTEKGPP-FVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIKTMPRRVVKLVVHGTGTIDNITISTTSH-----MAAFYAA |
8 | 3gdbA | 0.13 | 0.10 | 3.63 | 1.12 | CNFpred | | -----------NYRSVSGVLPTWRWWQTSTGEKLRAEYDF-NGGNSLKFSGDVAGKTDQDV-----------RLYSTKLEVT-EKTKLRVAHKGGKGSKVYMAFST-TPDYKFDDADAWKELTLSDNWTNEEFDLSSLA-----GKTIYAVKLFFEH-FNLGQLTISDNHQEPQ-SPTSFSVV |
9 | 1xsiA | 0.06 | 0.05 | 2.32 | 1.01 | CNFpred | | --------RYAEFKSG-----NLSARVSKGFWSLDFLRN---GERITGSQV--KNNGYVQDTN------NQRNYMFERLDLGVGETVYGLGERFT-RNGQTVETWNRDGGTSTEQAYKNIPFYMTRGYGVLVNHPQCVSFEV---GSEKVSKVQFSVESEYLEYFVIDG-PTPKAVLDRYTRF |
10 | 4bq2A1 | 0.10 | 0.09 | 3.23 | 0.88 | SPARKS-K | | ---------SHMLFDFENDQVPSNIHFLNARASIETYTGINGESKGLKLAMKQHSYTGLAIPEQPWDWEFTSASLYFDIVSVGHSTQFYLDVTDQNGAVFTRSIDIPVGKMQ----SYYAKLSNPPTWRQFVWMWGV-----KNLDLSGIAKISLSVTVIIDNIRIQPNPPQDENFLV----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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