Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGTLMSWRIVLLAVALCLWIAPQLKGYQPEVPLLSVSFILLLAGELIGRGVFYGL |
1 | 6btmC | 0.13 | 0.12 | 4.29 | 2.01 | SPARKS-K | | NKTVGWAWDITNFVWWVGIGHAGTLISAVLLLFRQR--WRMAINRSAEAMTIFSVVQAGLFPIIHMGRPWLAYWVLPIPNNSPLLWDVFAISTYLSVSLVFWWTMLRDRAIEEVSLVLAGLATPLVLSVHTIVSMDFAT-SVIPGWHTTIFPPYFVAGAVFSGFAMVNTLLIVMRKVQHIELMNIIIMITGSIVGVAYITELFVAWYSGVEYEQYAFLNRAPYWWAYWSMMTCNVFSPQFMWFKKLRTS---IMFSFIISIVVNIGMWFERFVIIVT |
2 | 6btmC | 0.15 | 0.14 | 4.86 | 2.53 | FFAS-3D | | -------WDITNFVWWVGIGHAGTLISAVLLLFRQRWRMAINRS--AEAMTIFSVVQAGLFPIIHMGRPWLAYWVLPIPNNSPLLWDVFAISTYLSVSLVFWWTGLLPDFAEEVSLVLAGLATPLVLSVHTIVSMDFA-TSVIPGWHTTIFPPYFVAGAVFSGFAMVNTLLIVMRKTLQHIELMNIIIMITGSIVGVAYITELFVAWYSGVEYEQYAFLNRATGPYWWAYWSMMTCNVFSPQFMWFKKLRTSIMFSFIISIVVNIGMWFERFVII-- |
3 | 6btmC | 0.14 | 0.14 | 4.68 | 2.60 | HHpred | | NKTVGWAWDITNFVWWVGIGHAGTLISAVLLLFRQRWR--MAINRSAEAMTIFSVVQAGLFPIIHMGRPWLAYWVLPWVNNSPLLWDVFAISTYLSVSLVFWWTGLLPRRFEEVSLVLAGLATPLVLSVHTIVSMDFATS-VIPGWHTTIFPPYFVAGAVFSGFAMVNTLLIVMRKVSQHIELMNIIIMITGSIVGVAYITELFAWYSGVEYEQYALNRTGPYWWAYWSMMTCNVFSPQ-FMWFKLR---TSIMFSFIISIVVNIGMWFERFVIIV- |
4 | 2vpyC | 0.16 | 0.13 | 4.44 | 1.56 | MUSTER | | NAQEFWHWTNALHFVLVGLAGGVALLAALLHLKGDA------EARRYTLYALMLIALDLFILWAE--SPARHIWLFLSFHPSPIWWGAWGLGLGFLTGGLLYLG-------KGSQRALAWALLVFSLVALSYPGLALAVNLNRPLWNG-LMAGLFPLTALVLALGLAALLKS-----PWALFPLRVLAGASLLLALLYPLTL----------PPEARGHLLEEAGFWYGLFLLLGLGT----------FWQ----ERLAPWAGLLAAAGLRALLVLA |
5 | 3rkoB | 0.10 | 0.10 | 3.57 | 1.47 | CNFpred | | --------LSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGNGAAAMKAFVVTRVGDVFLAFALFILYNELTLNFREMVEL-MLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMT--------HAFFKALLFLASGSVILACHHEQN |
6 | 6f0kC | 0.13 | 0.12 | 4.29 | 3.04 | HHsearch-2 | | NIPVGWGWPIVNFVFWVGIGHAGTLISAILFLFRQRWR--TSINRAAEAMTIFAVICALIFPTFHVGRVWAIYWTLPWPQKSPLLWDVFAVSSYFIVSLVFWYVGLIDRNYEKVYMLLAGLATPLVLSVHSVVSFDF-AVSIIPGWHTTIFPPYFVAGAIFSGFAMVVTLMVIARKANHLEKMNIIML-VTGTMVGFAYITEFFIWYSGVPYEYAFINRAGPYAWAYWTMMSCNLIFPQF-FWI--KKLRRNIPFMFIASIVVNIGMWFERFVITIT |
7 | 2vpyC | 0.14 | 0.12 | 3.96 | 1.75 | Neff-PPAS | | NAQEFWHWTNALHFVLVGLAGGVALLAALLHLKGDA------EARRYTLYALMLIALDLFILWAESPARFRFTHIWLFLSTSPIWWGAWGLGLGFLTGGLLYLG-------KGSQRALAWALLVFSLVALSYPGLALAVNLNRPLWNG-LMAGLFPLTALVLALGLAALLKSPWA----------LFPLRVLAGASLLLALLYPLTLP-----PEARGHLLEEAGFWYGLFLLLGLGT-------FWQER-------LAPWAGLLAAAGLRALLVLA |
8 | 6f0kC | 0.13 | 0.12 | 4.29 | 4.30 | HHsearch | | NIPVGWGWPIVNFVFWVGIGHAGTLISAILFLFRQRWR--TSINRAAEAMTIFAVICALIFPTFHVGRVWAIYWTLPWPQKSPLLWDVFAVSSYFIVSLVFWYVGLIDRNYEKVYMLLAGLATPLVLSVHSVVSFDF-AVSIIPGWHTTIFPPYFVAGAIFSGFAMVVTLMVIARKANHLEKMNIIML-VTGTMVGFAYITEFFIYSGVPYEQYAFINRAGPYAWAYWTMMSCNLIFPQF-FWI--KKLRRNIPFMFIASIVVNIGMWFERFVITI- |
9 | 6f0kF | 0.11 | 0.10 | 3.81 | 1.80 | PROSPECTOR2 | | RIWAFYFSYLVGWTFCLTLALGSLFFVMIQHLTRAQWVV--AVRRLPEALVWTFPVLIVLFIPILFGLHDLYHWTILAGKHAYLNVPFFLVRIYFFIWTLLAYKLYTPSIPAQQRKVSAWGMPLYGVTV-AFASYDF-LMSLDPHWYSTIFGVYFFAGSFFVALGFITTCYAILVRRPHFQDLGKLMFGFTAFWAYIAFSQYMLIWYGNLPEETLWYRHRHGWEVLSQVLIWGHFVLPFLILL--PWAAKRTPVLVGTMGIWFAIIHWIDLGLFFYR |
10 | 6btmC | 0.13 | 0.12 | 4.28 | 2.32 | SAM | | -KTVGWAWDITNFVWWVGIGHAGTLISAVLLLFRQRWR--MAINRSAEAMTIFSVVQAGLFPIIHMGRPWLAYWVLPWVNNSPLLWDVFAISTYLSVSLVFWWTGLLPDFFEEVSLVLAGLATPLVLSVHTIVSMDF-ATSVIPGWHTTIFPPYFVAGAVFSGFAMVNTLLIVMRKVSHIELMNIIIMITGSIVGVAYITELFVAWYSGVEYEYAFNRATGPYWWAYWSMMTCNVFSPQFMWFKKLRT---SIMFSFIISIVVNIGMWFERFVII-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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