Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | AALLLPSVACAHTGTGDVGGFMHGLAHPLGGLDHLCAMLAVGLWAAQTGGRALWAVPLTFVGVMTLGGMLPLLDIGLPFVEPGIVLSVLLLGVLIAAAVRLPLWLGSSMVGLFALWHGHAHGAEMPENASGIGYALGFMLATASLHLAGIGFGLGMQRLARERLVRFAGAGIALCGVYL |
1 | 3o7pA2 | 0.08 | 0.08 | 3.26 | 1.35 | SPARKS-K | | DNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNPTAELIPALCFAVIFIF |
2 | 3o7pA2 | 0.09 | 0.08 | 3.23 | 1.07 | MUSTER | | SFSASLSRLARIR-----HWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNPTAELIPALCFAVIFIF |
3 | 3rkoB | 0.11 | 0.10 | 3.67 | 1.15 | CNFpred | | FLAFALFILYNELGTLNFREMVELAPAHF-MLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAA----TMVTAGVYLIARTHGLFLMTP---EVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA |
4 | 5vkvA | 0.15 | 0.13 | 4.54 | 1.21 | HHsearch-2 | | ------------MSLSLTAAFLAGVLSFL-SPCVLP-LVPTYLFYLGGARGRPLFNALFFILGFGAVFFFTLLFEHRQTLARVGGVVLVLFGLYMLGLRPYEETSRPLGAFLLGATLALGIGPILGAVGFLLAYILGLAVPFFVVALFADRIKGWLRRRISHYVEVLAGVVLVLVGVLL |
5 | 3o7pA2 | 0.08 | 0.08 | 3.08 | 1.15 | Neff-PPAS | | SFSASLSRLARI-----RHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI |
6 | 4zowA2 | 0.12 | 0.12 | 4.31 | 1.28 | SPARKS-K | | --LSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITSSYEYGLLQVPIFGALIAGNLLLARLTTVRSLIIMGGWPIMIGLLVAAAATVHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSL |
7 | 5aymA2 | 0.09 | 0.08 | 3.21 | 1.02 | MUSTER | | WLILSYALLWL-SVLSPHGVLLAAYLKDEMRLP----ETEIGLFRGL----GAVFGLISTVSFPYLVRRLGLISS-SRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFERLIPRRGELNSLSSLTTTSATLILFSAGSLPQTEDFKYLVYVSLAAVLLANVV |
8 | 3rkoC | 0.11 | 0.11 | 3.84 | 1.12 | CNFpred | | VMLIAILALVFVHYTGVWTFNYEELLNTPGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG----ILLKTAAYGLLRFSLPLFPNAS-AEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGQLAYQGAVIQMIAHGLSAAGLFILCGQLY |
9 | 4zowA2 | 0.11 | 0.11 | 3.84 | 1.02 | Neff-PPAS | | ELGRDYKLVLKN-----GRFVAGALALGFVSLPLLAWIAQSPIIIITGSSYEYGLLQVPIFGALIAGNLLLARLTSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVSDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLM |
10 | 2vpyC | 0.13 | 0.12 | 4.27 | 1.22 | SPARKS-K | | ------AEFYGLPNAQEFWHWTNALHFVLVGLAGGVALLAALLHLKG--DAEARRYTLYALMLIALDLFILWAESPARSPIWWGAWGLGLGFLTGGLLYRALAWALLVFSLVALSYPGLALARPLWNGLMAGLFPLTALVLALGLAALLAGASLLLALLPEARGHLLEEPWAGLLAAAG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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