Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | INVYQQKKSLAQGMMDLALLSANANQLRYVLESCQNHPFFYVNLVFVSTSIFVQVVVGFGLIWKSQYNMNNPDDYRAATRINNLVSIGIFIITLVNVMLSAF |
1 | 6n3tA | 0.14 | 0.14 | 4.71 | 0.84 | SPARKS-K | | VLFFVFGTVIAAALPAIIGGLAIAGALGIMRLVAEFTPVHFFAQPVVTLGLGIAIDYGLFIVSRFREEIAEGYDTEAAVRRTVMTSGRTVVFSAVIIVASSV |
2 | 3ir7C | 0.14 | 0.14 | 4.67 | 0.79 | FFAS-3D | | -SQMLDRKNLASNLFHIGILGIFVGHFFGMLTPHWMYEAKQKMAMFAGGASGVLCLIGGVLLLKRRL--FSPRVRATTTGADILILSLLVIQCALGLLTIP- |
3 | 2ww9A | 0.16 | 0.11 | 3.57 | 0.37 | HHpred | | --------------------------------PNVNDPIYFLRGVNISSGLILQLLAGLKV---IKVNFKIQSDRELFQSLTKVFAVQYVILTNIFIFAGYF |
4 | 5xjjA1 | 0.10 | 0.10 | 3.64 | 0.74 | MUSTER | | VALATSFTNVTGFSIMYGLVGALETLCGQAYGAKQYEKIGTYTYSAIASNIPICFIISIIWFYIENI-GQDPDISRIAGSYAFWLIPVLFAQAIVIPLTRFL |
5 | 5u73A | 0.14 | 0.12 | 4.03 | 0.72 | CNFpred | | ---------EVIPFLVLAVGVDNIFILVQAYQRDE-DQQLGRVLGEVAPSMFLSSFSETVAFFLGALS-----VMPAVHTFSLFAGLAVFIDFLLQITCFVS |
6 | 6n3qA | 0.12 | 0.12 | 4.12 | 0.54 | HHsearch-2 | | IRSKQDRELFQIAQKVCAIILILGQALVVVMTGNYGAP------LPICLLLIFQLMFASLVMLLDELLLGSGFEGDKKRALNMFQVLMTVAIFLFVLYLQGF |
7 | 6dlcA | 0.15 | 0.15 | 4.95 | 0.85 | Neff-PPAS | | --LYKLKTFLENLRRHLDRLDKHIKQLRDILSENPEDERVKDAIDLSERSVRIVKTVIKIFEDSVRKKEKRKELDKLLDTLEKILQTATKIIDDANKLLEYL |
8 | 6n3qA1 | 0.11 | 0.10 | 3.57 | 0.80 | HHsearch | | VIAPERKVPYNQKLI----WTGVSLLIFLILGQIPRGTLLELVSPIITSSMIFQFLQGT---QLLQIRPESKQDRELFQIAQKVCAIILILGQALVVVMTG- |
9 | 6dlcA | 0.15 | 0.15 | 4.95 | 0.86 | SP3 | | --LYKLKTFLENLRRHLDRLDKHIKQLRDILSENPEDERVKDAIDLSERSVRIVKTVIKIFEDSVRKRPDDKELDKLLDTLEKILQTATKIIDDANKLLEYL |
10 | 5unfA3 | 0.12 | 0.12 | 4.18 | 0.58 | PROSPECTOR2 | | SAGIALMKNILGFIIPLIFIATCYFGIRKHLLKTNSYGMAAAVVLAFIICWLPFHVLTFLDALAWMGVINSCEVIAVIDLALPFAILLGFTNSCVNPFLYCF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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