Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | KFFDNLMNVFEMCEDLEKLDCLHMMFNIVKGIISLNSHQILEKILGDSLIMKVIGSLEYDPDAPQSLHYRNDVTAHVVFKEAIPIKNPMVLSKIHQTYRIGYLKDVILSRVVDDATATSLDSIINANKAAIVTLLKDDSNFFQELFARLRSPSTSVESKSDLVHFLHEFCSLSKSLEMELKLRLFKEL |
1 | 3gs3A | 0.09 | 0.09 | 3.24 | 1.01 | FFAS-3D | | ---AKVVDWCNELVIASPSTKCELLAKV-QETVLGSCAELAEEFLNMEVRKQVVAFVE-----QVCKVKVELLPHVIVVSMLLRDNSAQVIKRVIQACGSIYLQYLCSLMEPGDSAEQAWNILSLI-KAQILDMIDNENKFLEGVVVLQSFADEDEKLQEEGNNILDILLQFHGTISSVNLIACTSSL |
2 | 1vt4I3 | 0.15 | 0.08 | 2.67 | 1.03 | HHsearch | | ------------------------------------------------------------------------------------------EYALHRSIVDHYNSDDLIPPYLDQYFYSHIGHHLNIEHPERMTLFRMVFLDFRFLEQKIRHDSTASGSILNTLQQLKFYPYICDNDPKYTDLLRIAL- |
3 | 4hm9A | 0.09 | 0.09 | 3.27 | 0.87 | SPARKS-K | | GLLQWLLKRLKA--KMPFDANKLYCSEVLAILLQ-DNDENRELLGELDGIDVLLQQLSVFKRNPSTAEEQEMMENLFDLCSCL--MLSSNRERFLKGEGLQLMNLMLREKISRSSALKVLDHAMGPEGTDNCHKFVDIL-GLRTIFPLFMKKKVGTTEKEHEEHVCSILASLLRNLRGQQRTRLLNKF |
4 | 4i17A | 0.11 | 0.10 | 3.65 | 0.96 | FFAS-3D | | NY-AVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYK--------EAADYFDIAIKKNYNLANAYIGKSAAYRDKNNQEYIATGNATIEKLYAIYYAEENYKHATDSKKWKTDALYSLGVLFYNNGADVLRKATPNKEKYASEKAKA------DAAFKKAVDYLGEAVTLSPNRTEIKQQDQVKAI |
5 | 4jrbA | 0.15 | 0.12 | 4.12 | 0.28 | HHpred | | ----------NLQDDLQDFLALDQIIAIATDYLA-NDAEVQAAYLQSDEFETIVVALDALPELQNGLNAIDFLNGIHHIRRGVGI--TGLIDDVLAILPIEDLKALFNEKLETSPDFLALYNAIRSPFQSIVQTLNAMPEY-QNLLQKLREKGVDVDKII---ELIRALF------------------ |
6 | 4c0oA | 0.10 | 0.10 | 3.70 | 0.77 | MUSTER | | FYSSTVVSLLMTCVEKADEKMLMKVFRCLGSWFNLGVLD-SNFMANNKLLALLFEVLQ-QDKTSSNEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAR--DLDKVLNYCRIFTELCETFLEKIVCTLRTLELLLICAGHP--QYEVVEISFNFWYRLGEHLYKTNDEVIHGIFKAY |
7 | 4wv6A | 0.09 | 0.08 | 3.07 | 0.83 | CNFpred | | GVVPQLVKLLGAS----ELPIVTPALRAIGNIVTG-TDEQTQVVIDAGALAVFPSLLTNP-----KTNIQKEATWT---MSNITAGRQDQIQQVVNHGLVPFLVSVLSKADTQKEAVWAVTNYTSGGTVEQIVYLVHC-GIIEPLMNLLTAK--DTKIILVILDAISNIFQAAEKLETEKLSIMIEEC |
8 | 1vt4I3 | 0.11 | 0.08 | 2.86 | 0.74 | HHsearch-2 | | ------------------------------------EYALHRSIVDHYNIPKTF---DSDDLIPPYLYFYSHIG-----HHLKNIEHPERMTLFRMVFLDFRFLEQKIRSTAWNASGSILNTLQQLKF-YKPYICDNDPKYERLVNAILENLICS-----K----YTDLLRIALM--AEDEAIFEEAH |
9 | 5cwmA | 0.07 | 0.06 | 2.70 | 0.70 | Neff-PPAS | | KLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREADPEVALRAV-ELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGS--EEALERALRVAEEAARLAKRVLELAEKQG-DPEVARRAVELVKRVAELLERIARESGSEEAKER |
10 | 3ea5B7 | 0.12 | 0.06 | 2.08 | 0.38 | HHsearch | | ---------------------------------------------------------------------------------ELVSKDSVKTQQFAQRWITNQIKTNALTALVSIE--PRIANAAAQLIAAIADIELAWPELMKIMVDNTGAE-QPENVKRASLLALGYMCESAD---PQSQ------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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