Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | KARLEKLPEDVVSTMIALKWLGFLIDRVGIQNLERVLEFYYEIGWISEEVLNQLLRYAKGTRPHHRDPEWKPADKLTVQDHLISLLFIERLRG |
1 | 5cwdA1 | 0.14 | 0.12 | 4.03 | 0.74 | SPARKS-K | | --------TKEDARSTCEKAARKAAEEVAKQAAKDCLEVAKQAGMPTKEAARSFCEAAARAAAESNDE-------EVAKIAAKACLEVAKQAG |
2 | 4i97A2 | 0.10 | 0.10 | 3.55 | 0.69 | FFAS-3D | | ----SLYPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQVFAKAPADPELYKKMEAAVEFLNTFLEGQTYAAGDSLTIAD-IALLATMSSFE- |
3 | 5cowA2 | 0.15 | 0.12 | 3.96 | 0.26 | HHpred | | ---VALIPQHIELVTNALRFALWIVEFYETETNEKSIK---ELAFLDHSSKTLLIESFTKFLQGKDV---------KDQDHLKALE------- |
4 | 5cwlA1 | 0.14 | 0.12 | 4.06 | 0.80 | MUSTER | | -----TTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEI---TTEAVKLALEVVARVAIEAARRGNTD----AVREALEVALEIARESG |
5 | 5k3gA | 0.16 | 0.12 | 3.91 | 0.51 | CNFpred | | -------------DITIKEALSDLLHLHVNYELLDVATYALEDGFMSSTQLDYVRDQLYFYL-------------QKIRPNAVSLLDSWEFSD |
6 | 5gpeA | 0.19 | 0.15 | 4.86 | 0.34 | HHsearch-2 | | -----------------MMRIGELGKKADC--LVQTVRFYESEGLLPEPHLQLFIRRCRDMTLDEIRQNRRPELGCLVDAHIAQVRKMKELRA |
7 | 5cwlA1 | 0.15 | 0.13 | 4.34 | 0.66 | Neff-PPAS | | -----TTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARAVKLALEVVARVAIEAARRG--------NTDAVREALEVALEIARESG |
8 | 5gpeA | 0.19 | 0.15 | 4.85 | 0.46 | HHsearch | | -----------------MMRIGELGKKADC--LVQTVRFYESEGLLPEPHLQRFIRRCRDMTLDEIRQRDRPELGCLVDAHIAQVRKMKELR- |
9 | 5mwwA | 0.08 | 0.06 | 2.51 | 0.69 | SP3 | | -----ADKQTHETELTFDQVKEQLTESGKKRGYEEIAERMSSFE-IESDQMDEYYEFLGGVELISENEETEDLEHHH---------------- |
10 | 3c8eA1 | 0.17 | 0.16 | 5.29 | 0.49 | PROSPECTOR2 | | -----FLPQDLAKRTETMNWLFWLQGAA-PFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLAQHKLGGVYDAAEFLDAGSYKHVQRWAKEVGE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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