Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MKKVKRPFDDYVVYFREGSLNDREIADKLGVSKVNVWRMRQKWESGESVVNQDSRLTISEDTLEHLLSQTFKSEVNARKVRSELDIERANLELGFIRAFKQYSSVELTGMRTKIENLRAEIDALNKASSKKNKQVVNGEINSLKSELDEYIKECSIREMELYYECMKKLTTANEAESKSNY |
1 | 2cg4A | 0.10 | 0.06 | 2.28 | 1.01 | HHpred | | YLIDNLDRGILEALMGNARTAYAELAKQFGVSPETIHVRVEKMKQAGIIDVSPKQLGYDVGCFIGIILKSAKPALAKLESLDEVTEAYYTTGIFIKVMCRSIDALQHVL-INKIQT----------------------------------------------------------------- |
2 | 5nnvA | 0.04 | 0.04 | 2.19 | 1.20 | Neff-PPAS | | VDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVKEELSKQEAVFETLQAEVKQLRAQVKEKQQSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSSSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERE |
3 | 2cg4A | 0.11 | 0.08 | 2.96 | 1.07 | SP3 | | -YLIDNLRGILEALMGNARTAYAELAKQFGVSPETIHVRVEKMKQAG-IITGAR---------------------------IDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLD-EVTEAYYTTGHRSIDALQHVLINKIQTIDEIQQNPIMRTIKP-------------------- |
4 | 4uosA | 0.09 | 0.09 | 3.33 | 0.83 | SPARKS-K | | NEEVKKMLEKMIEEIKKMEKAIKKVKEMLEKMIKEIKKMLEKILKKKEMAEKILKMVIELAEKILKKAKEMEKILKKVKELGV------DNEEVMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN--GEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG-- |
5 | 2tmaA1 | 0.09 | 0.07 | 2.73 | 0.89 | FFAS-3D | | MQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKG-------------TEDELDKYSEALKDAQEKLELAEKK----------------ATDAEADVASLNRRIQLVEEELDRAQERLATALQEEAEKAADESERGMKVIESRAQKDEEKM-EIQEIQLKEAKH------- |
6 | 2dbbB | 0.12 | 0.08 | 2.76 | 1.05 | HHpred | | MRKLRVDMQLVKILSENSRLTYRELADILNTTRQRIARRIDKLKKLGIIIPDIDKLGY-MYAIVLIKSKVPSAKISEISDIEYVKSVEKGVGIIVRLLLKDIKDAE--NLISE------FLQRIK-NAENV-------------------------------------------------- |
7 | 4uosA | 0.12 | 0.12 | 4.11 | 1.00 | MUSTER | | NEEVKKMLEKMIEEIKKMLEKAIKKVKEM---EKMIKEIKKMLENGEDSEKILKKAEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDN-EEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVK |
8 | 3fmsA | 0.17 | 0.12 | 3.83 | 0.56 | CNFpred | | --------NLLKEMIL-EKLNVRELSEKLGISFTPVRDALLQLATE------------------------------------GLVKVVPRVGFFVTDVDKFIRETIETRIMMEVFCLENYFDKIAGS----------EELLEIKGEIDDVAASAAREFDDSDERLHKLFIRASGNELIISL |
9 | 4czdB | 0.04 | 0.03 | 1.45 | 0.52 | HHsearch-2 | | SHQFPEEQAVLRIVQANSLTPYADLAEQAGMTEAQVLELLGRLKASGAASIKHQKTGWTHNAMVAWKVTPDQVCGRKAAEHSHISHVYYRYEMYTMIHGRSEAECLGV--VE-------DVKRTT-SLKEHAILTYFT------------------------------------------- |
10 | 6ewyA | 0.08 | 0.08 | 3.08 | 1.06 | Neff-PPAS | | -DPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVTVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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