>PF04633 (348 residues) ERALSLFSYLSGTLAATPFLWCFIFKALYSFTLFTTEITAVFFWSLPVTHLALICMCLCP AAQKQLDRRLEWICASAVFAAVVCAAFSGFTFSRVPFIPGLCVLNCLLLLPYPLATATAV YQAPPIVHRYYELGFCGAFMVYYLLLFKKVFVSGVFWLPFIVFLVGGLLAFRHLEQHVYI RAGMQRRRAIFIMPGKYITYSVFQAWAYCRREVVVFVTLLLATLISTASIGLLTPVLIGL DKYMTLFYVGLLSCVGVSVASRRALFVLLPLAAVLLTLVHILGSGPDMLLVRSCLCCLFL VSMLAAMGVEIQLIRRKLHRALNAPQMVLALCTVGNLCISCLLSVINK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ERALSLFSYLSGTLAATPFLWCFIFKALYSFTLFTTEITAVFFWSLPVTHLALICMCLCPAAQKQLDRRLEWICASAVFAAVVCAAFSGFTFSRVPFIPGLCVLNCLLLLPYPLATATAVYQAPPIVHRYYELGFCGAFMVYYLLLFKKVFVSGVFWLPFIVFLVGGLLAFRHLEQHVYIRAGMQRRRAIFIMPGKYITYSVFQAWAYCRREVVVFVTLLLATLISTASIGLLTPVLIGLDKYMTLFYVGLLSCVGVSVASRRALFVLLPLAAVLLTLVHILGSGPDMLLVRSCLCCLFLVSMLAAMGVEIQLIRRKLHRALNAPQMVLALCTVGNLCISCLLSVINK | |||||||||||||||||||
1 | 6ei3A2 | 0.11 | 0.11 | 3.93 | 1.26 | SPARKS-K | -PRQIPFIIGNEACERFSFYGMRNILVQFLITSLLPERDAEAKHILHSFMIGVFFF--PLLGGWLADRFKYTTIIWFSLIYCAGHACLALFEDSRSGFFVGLGLIAFGAGGIKPLVASFMVDQFDAFYWIINFGSLFASLLIPLALKHLG-PSWAFGIPGILMFIATAVFWLGRKRYVPFFSLFDQKASTWVLPAW---FTASQMQALNPLLVMLLIPFNNLVLYPLLRRLSLRRMTSGIAFSGVAWIAVGAIQVAMEPMHIAWQILPYALLTFGEVLVSATGIEFAYSQVMSFWYLTTTVGNLWVLLSNVAVRNATVTSHIEAAFLMFFFAAFAFLAALAFGLYARR | |||||||||||||
2 | 6c3iA | 0.14 | 0.13 | 4.33 | 1.33 | FFAS-3D | --VIASIAYMPGNFATNIEGG-----ARYGYSLLWVILAANLMAMVIQNLSANLGIASGRLIRERWPRPLVWFYWIQAELVAMATDLA-------EFLGAALAIQLLTMFWGAVVTGVVTFWLLNLLELAVGA-FVLMIGVAYLVQVVAAVGAGFVSAYLAVGIIGAIYLHSALDTTEEKRRLVRLNR-------------VDVIAAMGLAGLINMSMLAVAAATAYQTLTPLLGPAASVLFAVALLASGLSSSAVGTMAGDVIMQLRRLITMLPAFIVILLGMDPSSVLILSQVILCFGVPFALVPLLLFTARRDVMGALVTRRSFTVIGWVIAVIIIALNGYLL-- | |||||||||||||
3 | 3rkoB | 0.12 | 0.11 | 3.84 | 1.60 | CNFpred | NLVLDGLSLTMLSVVTGVGFLIHMYASWYMR----EEGYSRFFAYTNLFIASMVVLVLAD--------NLLLMYLGWEGVGLCSYLLIGFY-FVVTRVGDVFLAFALFILYNELGTLNFREMVEL-MLMWATLMLLGGAVGKSAQLPLQTWLADAMPTPVSALIHAATMVTAGVYLI----------------------ARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVI-IPLVYLCFLVGGAALSAAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVF | |||||||||||||
4 | 1pv6A | 0.09 | 0.09 | 3.47 | 1.25 | Neff-PPAS | -TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTIN--NQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASNRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGN | |||||||||||||
5 | 3g5uA1 | 0.10 | 0.09 | 3.22 | 1.16 | PROSPECTOR2 | AGWLDRLYMLVGTLAAIIHGVALPLMMLIF--------GDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGA-------------GVLIVAYIQVSFWCLAAGRQIH---KIRQKFFHAGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRGWKLTLVILAIS--------------PVLGLSAGIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYT | |||||||||||||
6 | 6h7dA | 0.11 | 0.11 | 3.86 | 1.19 | SPARKS-K | TAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFTAYCKLQLFTSSLYLAALVASFMASVITRKHRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPGALNIGFQMAITIGILVANLINYGTGWRVSLGAVPAVVMVIGSFIAKQMLKKIQDLIDAVEAAKK---VENPWKNIKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTAALMSAVITGVVNMLSTFVSIYAVDRRRLLFLEGGIQMFICQLLVGSFIGGTLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQF | |||||||||||||
7 | 5t77A | 0.09 | 0.08 | 3.11 | 1.32 | FFAS-3D | --ILFSIATFFSRILG------LFRDVLFAKYFGVSYELDAYFIAIMFPFFLRKVFGEGAKSGEEKDKFLSSVINGFSLIILALVILSYFFP--------ELIINLFGAGSSKILAKKLLLITSPSIYFIFLWAISYSILNFFWPALTPSISNITIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHKYYFTIKHFPHFLKLFFPTFMTMVVSQINTVVDMNVVSFYDKGSISYLQYASRFYLLPYGLFAVSVSFNYHLNDALKTTLFFTIPSMVGLIFLSTPIIRFFYSKILIAYTLGLPFYGIYSTISRSYHAIKNTKTAATIVSLSNIILDIIFG---- | |||||||||||||
8 | 3rkoC | 0.11 | 0.11 | 3.84 | 1.59 | CNFpred | TGLLGVLAVLCS-QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKRITAATKFFIYTQASGLVMLIAILALVFVHYVWTFNYEELL-VEYLLMLGFFIAFAVKMPVVP--LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAWLGVIGIFYGAWMAF-----AQTDIKRLIAYTSVSHMGFVLIAIYTGQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWKWLPALSLFFAVATLGMTGNFVGEFMILFGSITVISTFGLVFASVYSLAMLHRAY-LRELFMILLLVVLLVLLGFYPQPI | |||||||||||||
9 | 5aymA | 0.08 | 0.08 | 3.17 | 1.24 | Neff-PPAS | -LLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQVVKWGVWLQFFAILAGMVFFGMLDGLVRAGGVLFIALALSGVMASLGSQITDISVGNDLNSWLRRIDLATEVGAPILAGALFPL-AGLFLIGLWNLVSFVPEYFLLRNVIQRDPIFWLILSYALLWLSVLSDEMRLPETEIGLFRGLGAVFGLISTVSFPYLVRRLGLISSSRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTEDFKYLVYVSLAAVLLANVVFIKWSSR | |||||||||||||
10 | 5y50A | 0.07 | 0.07 | 2.74 | 1.13 | PROSPECTOR2 | DGFLRETYIAGAMIAVNSSMYVLQVISIMMVGHLGELFLSSTAIAVSFCSVTGFSVVFGAKQYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGVAQEAGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCICWSLVFKFGLGSLGAAIAIGVSYWLNVTVLGLYMTFSSSC-------SKSRATISMSLFEGMGEFFRFGIPSASMICLEWWSFEFLVLLSGILPNPKLEASVLSVCLSTQSS----------LYQIPESLGAAASTRVANELGAGNPKQARMAVYTAMVITGVESIMVGIVFGARNVFGYLFSSETEVVDYSVIFDALHAALSGVAVM | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |