Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AFTGSGSTGTTKLTVTEQCQVLVTGSDVTKTRGELTDGARVGVLSVTAKGCNTEHAALRAQPDNYHQGKIVLIRDDYQARINVRLQATDGRAWNTNGDTVYRADAGNWGGSLFVVVDGDNVDKPTGSYTLNLDWGYWVS |
1 | 2bcmB | 0.46 | 0.46 | 13.42 | 2.65 | SPARKS-K | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSRNH-DKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
2 | 2bcmB | 0.46 | 0.46 | 13.42 | 2.92 | FFAS-3D | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSRNH-DKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
3 | 2bcmB | 0.46 | 0.46 | 13.42 | 6.00 | HHpred | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSR-NHDKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
4 | 2bcmB | 0.46 | 0.46 | 13.42 | 2.97 | MUSTER | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSRN-HDKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
5 | 1usqA | 0.49 | 0.48 | 14.01 | 2.79 | CNFpred | | SFTPSGTTGTTKLTVTEKCQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCDARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPTDNSAWTTDNGVFYKNDVGSWGGIIGIYVDGQQTNTPPGNYTLTLTGGYWA- |
6 | 2bcmB | 0.46 | 0.46 | 13.42 | 4.69 | HHsearch-2 | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSR-NHDKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
7 | 2bcmB | 0.46 | 0.46 | 13.42 | 3.61 | Neff-PPAS | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSRNH-DKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
8 | 2bcmB | 0.47 | 0.46 | 13.42 | 7.15 | HHsearch | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSR-NHDKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWT- |
9 | 2bcmB | 0.46 | 0.46 | 13.42 | 1.47 | PROSPECTOR2 | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMT-SRNHDKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
10 | 2bcmB | 0.46 | 0.46 | 13.42 | 1.83 | SAM | | TFQASGTTGITTLTVTEECRVQVGNVTATLARSKLKDDTAIGVIGVTALGCNGLQAALQADPDNYDATNLYMTSR-NHDKLNVKLKATDGSSWTYGNGVFYKTEGGNWGGHVGISVDGNQTDKPTGEYTLNLTGGYWTN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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