Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NVYFHWMVDVLPRLELLRQSGINFDQIDWFLVNSYQAPFQRETLTRLGIPEFKILESDQFPHIQAQQLIVPSFAGHTGWLQPWAIDTLRRWFLPKSSNSGKNYPERIYISRGDASYRRVLNEDEVIQFLRPWGFVTVQLETLSFTEQVALFAEAKVIMGAHGSGLTNILFCQPGTQVIEFMSPHYNRHYYWVISQYLGLEHYCLTG |
1 | 6enzA | 0.09 | 0.08 | 2.98 | 0.64 | SPARKS-K | | IFNPGGSVSNMCAMNLARYRHCPDLPRLILFTSAECHYSMKKAASFLGIGTQNVYFVETDGRGKMI------------------PEDLEKQIWQARQEGA--VPFLVCATSGTTVLGAFDPLDEIAEVCERHGLWLHVDASWGGSALVLLIHRADSVAWN----PHKMLMAGIQCSALLVKDKSDLLKKCYSAKATDKFYDVSYDT |
2 | 2gt1A2 | 0.12 | 0.07 | 2.40 | 0.70 | FFAS-3D | | --------------------------------------IAQHFLTNLPTDAGEYA------------VFLHATTRDDKHWPEEHWRELIGLL-------ADSGIRIKLPWGAPH-------EEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSH--------------------------LTAALDRPNITVYG |
3 | 4a26A | 0.10 | 0.09 | 3.28 | 0.32 | HHpred | | -----IRSELKDKVAALRELGGRVPGLASIIVGQRMKKYVHKAAAEVGMAS-FNVELPEDIDPNCHGIIVPLPKHLAPPFTPCTAKGVIVLLKR-CG-IEMAGKRAVVLGRSNIVG------APVAALLMKENATVTIVHSGTTEDMIDYLRTADIVIAAMGQPYVKGEWIKEGAAVVDVGTTPVGDVCFEEAAARAAW-ISPV-- |
4 | 2oycA | 0.14 | 0.13 | 4.33 | 0.62 | MUSTER | | E---RAVPGAPELLERLARAGKAA--LFVSNNSRRARPELALRFARLGFRAEQLFSSALCAARLLRQRLPGPPDAPGAVFGEGLRAELRAAGLRLAGDPSAGAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWH----PLSDGSRTPGT--GSLAAAVETASGR---QALVVGKPSPYFECITENFSID--TLVG |
5 | 3sqwA | 0.10 | 0.09 | 3.40 | 0.91 | CNFpred | | --FRDDLETISGILNEKNSK--SADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVEPEAHIDQSVVISEKF--ANSIFAAVEHIKKQIKER-------SNYKAIIFAP-----TVKFTSFLCSILKNEFLPILEFHKITRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTAEGSSVLFIC |
6 | 2pffB | 0.13 | 0.13 | 4.34 | 0.61 | HHsearch-2 | | DSWESFFVSVRKAITVLFFIGVRCYEA--YPNTSLPPSILEDSLENNEGVPSPMLSISNLKQVE-ISLVNGAKNLV-VSGPPQSLYGLNLTLRKAKAPSGLDQERKKFSNRFLHSHLLVPASDLINKDLVKNNVQIPVYDTFD-------GSDLRVLSGSISERIVDCIIRLPATHILDFGPGGASG--LGVLTHTLDINPDDDYG |
7 | 4la4A | 0.08 | 0.07 | 2.88 | 0.67 | Neff-PPAS | | ---YGHIYKMAEAIAAGAREVGDVEVTLLQVPELMPEEVQVKSGIKGYRAAFGSIPYATPEVLAEADAIIFGTPTRFGNMCSQMRNFLDQTGGLWMSGGLIGKVGSVFTSTASQHGGQETTITSFHTTLLHHGMVIV---GVPYSEPGLTNMTEISGGTPYGASTLAGADGSR-----------QPSENELQIARFQGKHVATIAK |
8 | 2eklA3 | 0.10 | 0.04 | 1.42 | 0.37 | HHsearch | | ----------------------------------------------------------------------VSKDA-KPIIDYPQ--------FE------LMKDNVIIVNTS---RAVAVNGKALLDYIKKGKTDVFWNEPPKEEWELELLKHERVIVTTHIGAQ----------------------------------------- |
9 | 1wr8B | 0.16 | 0.12 | 3.87 | 0.60 | SP3 | | H------EKALEAIRRAESLG-----IPIMLVTGNTVQFAEAASILIGTSGP-VVAEDGGAISYKKKRIFLASMDEE----WILWNEIRKRFNARTSYTMPDRRAGLVIMRETIN------VETVREIINELNLVAVDSGFA-----------------------------------IHVKKPWINGSGIEKASEFLGIKPVAHVG |
10 | 1nf2A | 0.07 | 0.06 | 2.58 | 0.71 | PROSPECTOR2 | | LEISEKDRRNIEKL---------SRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILN-----EKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDN---------EEIKSYARHSNVDYRVEP--NLSELVSKMGTTKLLLIDTPERLDELKRFKDVVKVLEIVPKNVDGKALRFLRERMNWKLRVAME |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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