Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MTFAAIMYKVQPGHEEEIAEIFSPANFKRVGTAQVQDQQGEQSGRILGTGLFIQDDTMVRVIQHEGSLADLGAHMGSQRGVHEAERRLAPFLAAQRDTETSEGFQAHFRNSIMQCVQQR |
1 | 1tuwA | 0.16 | 0.14 | 4.74 | 1.62 | SPARKS-K | | AYRALMVLRMDPADAEHVAAAFAEHD----------TTELPLEIGVRRRVLFRFHDLYMHLIEADDDIMERLYQARSHPLFQEVNERVGQYLTPYADWEELKDSKAEVFYSWTAP---- |
2 | 1tuwA | 0.17 | 0.13 | 4.43 | 1.47 | FFAS-3D | | -YRALMVLRMDPADAEHVAAAFAEHDTTELP----------LEIGVRRRVLFRFHDLYMHLIEADDDIMERLYQARSHPLFQEVNERVGQYLTPAQDWEELKDSKA------------- |
3 | 1x8dA | 0.17 | 0.14 | 4.71 | 1.76 | HHpred | | MIRKAFVMQVNPDAHEEYQRRH---NPIWPELEAV-----LKSHGAHNYAIYLDKNLLFAMVEIE-SEE-RWNAVASTDVCQRWWKYMTDVMPANPDNS-PV-------SSELQEVFYL |
4 | 1ivsA | 0.16 | 0.16 | 5.31 | 1.20 | MUSTER | | KDFGTGALKVTPAHDPLDYEIGERHGLKPVSVINLEGRMEGERVPLRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWWLRMAEEVLKGLRRGDIAFVPER |
5 | 1x8dA | 0.14 | 0.10 | 3.44 | 1.08 | CNFpred | | MIRKAFVMQVNPDAHEEYQRRH---NPIWPELEAV-----LKSHGAHNYAIYLDKNLLFAMVEIESE--ERWNAVASTDVCQRWWKYMTDVMPAN------------------------ |
6 | 1x8dA | 0.17 | 0.14 | 4.71 | 2.41 | HHsearch-2 | | MIRKAFVMQVNPDAHEEYQRRH---NPIWPELEAV-----LKSHGAHNYAIYLDKNLLFAMVEIE-SEE-RWNAVASTDVCQRWWKYMTDVMPANPDNS-PV-------SSELQEVFYL |
7 | 1tuwA | 0.16 | 0.13 | 4.45 | 1.99 | Neff-PPAS | | -YRALMVLRMDPADAEHVAAAFAEHDTTELPLEIG----------VRRRVLFRFHDLYMHLIEADDDIMERLYQARSHPLFQEVNERVGQYLTPYADWEELKDSKA-----------EV |
8 | 1x8dA | 0.17 | 0.14 | 4.70 | 3.86 | HHsearch | | MIRKAFVMQVNPDAHEEYQRRH---NPIWPELEAV-----LKSHGAHNYAIYLDKNLLFAMVEIE-SEE-RWNAVASTDVCQRWWKYMTDVMPANPDNS-PV-------SSELQEVFY- |
9 | 1tuwA | 0.15 | 0.13 | 4.23 | 0.78 | PROSPECTOR2 | | AYRALMVLRMDPADAEHVAAAFA--EHDTTELPLEIGVR--------RRVLFRFHDLYMHLIEADDDIMERLYQARSHPLFQEVNERVGQYLTPAQDWEELKDS-----------KAEV |
10 | 1x8dA | 0.13 | 0.10 | 3.48 | 0.94 | SAM | | MIRKAFVMQVNPDAHEEYQRRHN---PIWPELEAV-----LKSHGAHNYAIYLDKNLLFAMVEIESEER--WNAVASTDVCQRWWKYMTDVMPANPDNSP------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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