Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | VPAGITKYREGLYPLELFTKEEAGQVIDMIESRQKKYYEEFGLHFIHASDEWYILAGREFPEEERYDGYIQLENGVGMMRLLINEFQEALEQLRRSQEYEQMKKSFSRTVTIATGKLTYQTISKFAETLMEEFPGLTVHVYAIRNDFFGETITVSGLITGQDLIGQLKEKKESGVKLGDTLLIPGNMLRSGEQVFLDDLTVEDARRALEMEVTAVE |
1 | 5cwcA | 0.17 | 0.13 | 4.25 | 0.61 | SPARKS-K | | LRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERAGIDLAILIKECVENAQREG-----YD--------ISACRAAAEAFKRVAEAAKRAGITSS-----------EVLELAIRLIKECVENAQREGYDI-------------SEACRAAAEAFKRVAEAAKRAG----------------ITSSETLAIEEIRVEEAQREGNDISEACR |
2 | 4ix1A | 0.12 | 0.10 | 3.41 | 0.66 | FFAS-3D | | APEGVGVYQTFPYPNFRVDATNIKRAVEQLETSAAALGSAGVDIVGQVGTPFSFAGGT----------------GLEWAEDISTKLEKASGKPVGLSIVEALQERGYKTVAISSTYYSRELSERYTQFL--EAGGIRVLTIK--------------NWPASYAYKSAREVAAEAPEA-DCIISGAAVHTD---------IIAPLEADLGKPV---- |
3 | 6n2nA2 | 0.15 | 0.12 | 3.92 | 0.28 | HHpred | | -----GGHGDPRIVLSVEDVKDCISMTVDGLNLAEK----YQAPVIVLSDGSLAFSTQPRPKPETYKRYELTEDNPANHELMHRKQNSVLDFYKNM----EVEGVEEADVGIITWGSTIGVVREAMQRLTA--EGLKVKAMVPEVNFQ-------GQ-LSHFIRAETSI-------K-PIP-----YTIC-GG---LPFTPEMIVNRVKEE----- |
4 | 1fobA | 0.09 | 0.08 | 3.00 | 0.59 | MUSTER | | ---GINSIR-VNPSDGSYDLDYNLELAKRVKAA-----------SLYLD--LHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIERAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWD-------QQNYFYETVLATGELLSTDFDYFGV----PFYSASATLASLSLANLQSTYDKPVVVVE |
5 | 4zdpA | 0.07 | 0.05 | 1.89 | 0.69 | CNFpred | | ---------------------GSSLLNKITNSLVLDIIKLAGANCFVVPM-----------------------ATGMSLTLCFLTLRHKRP--------------KAKYIIWPRID--QKSCFKSMITA-----GFEPVVIENVLE------GDELRTDLKAVEAKVQELG-----DCILCIHSTTSCFA--PRVPDRLELAVICANYDIPHIVNN |
6 | 2pffB | 0.14 | 0.12 | 4.30 | 0.51 | HHsearch-2 | | HSQGIAETDSW--ESFF---VSVRKAITVLFFIGVRCYEAYPNTPSILEDSLENNEGVPSPM-LSISNLTQEQ-----VQDYVNK---TNSHLPAGKQ-VEISLVNGAKNLVVSGPSLYGLNLTLRKAKAPGLDQSRIPFSERKLKFSNRFLPVSHLVPASDLINKDLVKNNVSFNAKD-IQIPVDTFDGSDLRVLSGSISERIVDIIGVRVIVAG |
7 | 3fvvA | 0.08 | 0.07 | 2.89 | 0.67 | Neff-PPAS | | YQWADFLARTGRAG-------DPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHS---PVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAG----------DLCALVTA-TNSFVTAPIARAFG--VQHLIATDPEYRDGRYTEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSVPLLEAVTRPIAPSPGLREIAQARGWQVIDLF |
8 | 2onrA1 | 0.11 | 0.04 | 1.52 | 0.47 | HHsearch | | -------------------------------------------------------------------------------------------------------GHMNVKLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGS---------------AATIRKVTLGR-----KADVIATADYLIQKYPEF--ANWT-----IMFAKGITIP- |
9 | 3ua3A2 | 0.12 | 0.06 | 2.27 | 0.72 | SP3 | | -------------------------------------------------------------DSGVYNTFEQD----------QIKYDVYGEAVVGALKDLGADGRKTVVIYLLRGTKILKSEREYNNTFRQGQESLKVKLYIVEKN--------------PNAIVTLKYNVRTWKRESDR-------------------SLPGIAKDRGFEIIVSE |
10 | 2p5tB | 0.14 | 0.11 | 3.82 | 0.71 | PROSPECTOR2 | | --------------IQDYTDSEFKHALARNLRIHRIKQKEFQGNIVIIDDSFR----SQHPHYLELQQ----EYGKDSVEYTKDFAGKMVESL------VTKLSSLGYNLLIEGTLRTVDVPKKTAQLLKN--KGYEVQLALILYIINPNQHHDFIV---NHLVDNTR--KLEELAIFERIQI----YQRDRSCVYDSKEADVLQELFFGEWLLEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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