Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QTAAIMEILHSIVGLVRSPVSSTLPQITGRLFMIWGILRSFPEIHTHIFVTSLLISWCITEVTRYSFYGMKESFGFTPSWLLWLRYSTFIVCFPVGMVSEVGLVYIVVPFMKASEKYCLRMPNKWNFSIKYFYASVFFMVLYAPVYLHLFHYLIVQRKKALA |
1 | 5u71A1 | 0.10 | 0.10 | 3.61 | 0.97 | SPARKS-K | | LLLIVIGAIAVVAVLQPVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGEGE---------GRVGIILTLAMNISTLQWAVNSSIDVDSLMRSVSRVFK |
2 | 3o0rB1 | 0.14 | 0.12 | 4.25 | 0.82 | FFAS-3D | | QAVAKPYFVFALI----------LFVGQILFGLIMGLQYVVGDFLFPMVHTNLLIVWLLFGFMGAAYYLVPEESDCELPKLAWILFWVFAAAGVLTILG---YLLVPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVLRGRKTAI- |
3 | 5a63C | 0.13 | 0.12 | 4.27 | 0.28 | HHpred | | ------GPAFALLITVAGDPLRVIILVAGAFFVVWFILVHVTDLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKAAEDGRSPISIRQMAYVSGLSFGIISGVFSVINILA--DALGPGVVGIHGDSPYFLTSAFLTAAIILLHTF-WGVVFFDACERRRYWA- |
4 | 4xydA1 | 0.12 | 0.10 | 3.74 | 0.93 | MUSTER | | QSIALVYFAVALGLF----AIQVSGGLLLGWIYVSPNFLSEILPFNIMLHTNSLIVWLLLGFMGAAYFVIPEESEREIHS--PLLAYLQLAIMVLGTLGVVVTYLFNL-----FEGNWLLGKEGREFLEQPVWVKMGIVVAALIFMYNISMTVLQGRK---- |
5 | 3rkoB | 0.08 | 0.07 | 2.72 | 1.09 | CNFpred | | MWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAA--TMVTAGVYLIARTHGLFLMTVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ----------------AWDAAIFHLMTHAFFKALLFLASGSVILACHHEQN |
6 | 1vt4I3 | 0.18 | 0.15 | 4.84 | 0.66 | HHsearch-2 | | YALSIVDHYNIPKTFDSDDLIPYLDQYFYSH-----IGHHL-KNIEHPERMTLFRM-----VFLDFFLEQKIRWNASGSILNTLQQLKFYKPYICDNKYE-RLVNAILDFLPKIEENL-------ICS-KYTDLLRI--ALMA----EDEAIFEEAHKQVQR |
7 | 4rfsS | 0.11 | 0.10 | 3.60 | 0.91 | Neff-PPAS | | -SMTLIGLTVIVAGSALGPRDGLLIGGFWGLITFVRAFTWPSSPVAPLIFTNPLISILPRLLMGLVAGSLYLWGRHRQWS----MRQAMQVAAGCAALTNTVLVLGLVFLFYQTPA------VLGYVLMISLFTGIPELILDVLVAPLIAMPLRRQWERLKP |
8 | 4b4tS1 | 0.18 | 0.09 | 3.02 | 0.40 | HHsearch | | QNIILRSTMMKFLKILKNETKAMLINLILRDFLNNGEVDEYPHTV------------SSSLEARYFFYLSKIAIQ--------LDYS------------TANYIIAAIRKA----------PHNSKS----------------------------------- |
9 | 6bhpA | 0.10 | 0.09 | 3.42 | 0.97 | SP3 | | ---GLNKFIYVGL------VISQLLTLAAYVVVTAGAALLQKKANTLTLFDTQEGIDKYTPVYKEVFTATTYIIAYPQQPQYQFQYQWWIIQFELFVFLLTAACTVFPSIIKRMRPVAL----TFIASALVLVMDNINAIFFLLRNETAKAVFDDYRIATAQ |
10 | 5h7cA3 | 0.10 | 0.10 | 3.83 | 0.73 | PROSPECTOR2 | | DSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEAKELVIYIVILAELAKQSTDSELVNEIVKQLELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|