Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MFDVLMYLFETYIHSDAEVMIDQDELTDELSRAGFHQDEIYKALGWLERLANLHDSERETYVTCSAPSSMRIYAPQELDRLSAECRGFLLFLEQAKVLNAETREIVIERLLELDTPEIELDDLKWVVMMVLFNVPGSENAYQQMEELVFDESDGVLH |
1 | 5cwjA | 0.12 | 0.10 | 3.40 | 0.77 | SPARKS-K | | -----------------DSEEEQERIRRILKEARGTEESLRQAIEDVAQLAKK----------SQDSEVLEVILRIAKESGSRQAIRAVAEIAKE-AQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAEEAIRVIRQIAEESGSEEAR |
2 | 3d5lA | 0.14 | 0.11 | 3.92 | 0.75 | FFAS-3D | | --DQQAKAYSRMLDYLSYQMRTESDIVKKLKEIDTPEEFVEPILKKLRG-----------QQLIDDHAYAASYVRTMINTDLKGPGIIRQHLRQKGI-----GESDIDDALTQFTPEVQAELAKKLALKLFRNQPERRREQKVQQGLT--------- |
3 | 5vylA | 0.12 | 0.10 | 3.63 | 0.39 | HHpred | | ----LQQTWTLIQ-----NTNSPSVVINTLIDAGFTPSEVQQLFGCIALAGSNVFGLARE--YGYYANYVKTFRRV----QGASEHTHGRLCEAVG-LSGGVLSQTLARIMGPAV---PTEHLASLRRALFFSSGQRETALIWIDVYGQTHWDITPT |
4 | 6fwrA | 0.17 | 0.15 | 5.01 | 0.64 | MUSTER | | QLDLFTKLVATCMEQFRPKTIPPLAIPERLNAH---CEELYELIASLNNILN-------LYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEML----RGLAELFLNDLSEKDIVR--LHRLILQMNRALGMF---EAQSKLWRLASLAQSSGAPV |
5 | 3s4wB | 0.13 | 0.11 | 3.97 | 0.63 | CNFpred | | IILFGSLLYKYAFKF---DTYCQQEVVGALVTHVGTEAEVDTALDVLLELIVLNASAMRLNAAFV--DYLENMSPQQIRK----IFCILSTLAFSQQ-IQDDMHLVIRKQLSST--VFKYKLIGIIGAVTMAGIMQRTQVTSLLQLVHS-------- |
6 | 1vt4I3 | 0.13 | 0.11 | 3.78 | 0.53 | HHsearch-2 | | RSIVDHYNIPKTFDSDD-LIPPDSHIGHHLKNI--EHPERMTLFLDFRFLEQKIRHD-----STAWNASGSILNTLQQLKF------YKPY---ICDNDPKYERLVNAILDFLPKIEEICSKYTDLLRIALMAED-EAI----FEEAHKQVQRGGGG |
7 | 1q80A | 0.09 | 0.09 | 3.36 | 0.60 | Neff-PPAS | | -VQKMKTYFNRID-FDKDGAITRMDFESMAERFAMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVNPEAKSVVEGPLPLFFRANNISRDEYGIFFGMLG------LDKTMAPASFDAIDTNNDGLEEFVIAGSDFFMNDGDSTNK |
8 | 3e3vA1 | 0.18 | 0.06 | 1.86 | 0.59 | HHsearch | | ISKGYNAAL-NYLSYQ---LRTRKEVEDKLRSLDIHEDYISEIINKLIDLDLI-------------------------------------------------------------------------------------------------------- |
9 | 2ggzA | 0.10 | 0.09 | 3.32 | 0.65 | SP3 | | -------WYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFMQEKMEQKLKWYFKLYDADGNGSIDNELLDMFMAVQALNGQQTLSPEEFINLVFHKNDGELTLEEFINGMAK------DQDLLEIVYKSFDFSNVLRVIC |
10 | 5d1rA | 0.07 | 0.07 | 2.84 | 0.62 | PROSPECTOR2 | | QLELLTLLLVDAYSDL------ADTVDRARDDTVADSDDVIAIARAVRGWAVTNPARWALLYGSPVPGY--HAPPDRTAGVATRVVGAFFDAIATGDIRLMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVYGADMLTDPGVVFDAQTLAEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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