Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | TYMLIIISALISLFAQFLVNSRFSKYSRVRSRSGMTGAQAAERILQSQGIYDVAIQRVSGKLTDHYDPRNKTLNLSDAVYASTSVAAVGVAAHECGHAIQHARGYAPLSFRSALVPVANIGSQLSWLFIILGIFFGGSHTLIMIGILMFSAAVLFQLVTLPVEFNASGRALKLLSETGILQKDEVSDTRKVLSAAALTYVAAAATAVLQLLRLLRLF |
1 | 4il3A | 0.17 | 0.15 | 5.02 | 1.25 | FFAS-3D | | -YIMVFLFVVQILAMTIIPVFIMPLFNKFTPLEDGELKKSIESLADRVGFPLDKIFVIDGSKRSSLPFTSKRIVLFDTLVNSNSTEITAVLAHEIGHWQKNH-----------IVNMVIFSQLHTFLIFSLFIIIGFMLFNDLLTPLECAMQFIMSLISRTHEYQADAYAKK------LGYKQNLCRALIDLQIKNLPLYSSYHYSHPTLAERLTAL |
2 | 4il3A | 0.16 | 0.14 | 4.76 | 1.11 | HHsearch-2 | | DFLWMVVQILAMTIIPVFIMPLFNKFTPLE---DGELKKSIESLADRVGFPLDKIFVIDGSHSNAYFFTSKRIVLFDTLNSTDEI--TAVLAHEIGHWQKNHIVN------MVIFSQLH--TFLI--FSLFTSIIGFMLFNDLLTPLECAMQFIMSLISRTHEYQADAYAKKL-G-----YKQNLRALIDLQI-KNLSTMNDPLYSSPTLAERLTAL |
3 | 4il3A | 0.15 | 0.14 | 4.63 | 1.15 | HHsearch | | DFWFFVVQILAMTIIPVFIMPLFNKFTPLE---DGELKKSIESLADRVGFPLDKIFVIDGSHSNAYFFTSKRIVLFDTSNSTDEI--TAVLAHEIGHWQKNHIV------NMVIFSQLH--TF--LIFSLFTSIIGFMLFNDLLTPLECAMQFIMSLISRTHEYQADAYAKKL-G-----YKQNCRALIDLQIKN-LSTMVDPLYSSYHLAERLTA- |
4 | 5k7vA | 0.09 | 0.08 | 3.12 | 0.96 | SPARKS-K | | IEEIARLATAAIQLIEALAEEFMARAISAIAELAKKAIEAIYRLADNHT--------------------------TDTFMARAIAAIANLAVTAILAIAALASNHFMARAISAIAELAKKAIEAIYRLAFMAAAIEAIALLATLAILAIALLAEFMAKAISAIAELAKKAIEAIYRLAHTSPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEEYKE |
5 | 4aw6A | 0.12 | 0.11 | 3.91 | 1.16 | FFAS-3D | | --FTLVVSLVLVTIYADYIAPLFDKFTPLPEGK---LKEEIEVMAKSIDFPLTKVYVVEGSKRSSFFKNKRIVLFDTLLEQGCKNEEVAVLGHELGHWKLGH------TVKNIIISQMNSFLCFFLFAVLITLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKK------LGKAKDLYSALIKLNKDNLGFLFSMWHPLLERLQALKTM |
6 | 4il3A | 0.16 | 0.13 | 4.29 | 0.72 | HHpred | | -MVFFVVQILAMTIIPVFIMPLFNKFTPLE---DGELKKSIESLADRVGFPLDKIFVIDGSHSNAYFFTSKRIVLFDTSNSTDEI--TAVLAHEIGHWQKNHIV------NMVIFSQLH--TF--LIFSLFTSIIGFMLFNDLLTPLECAMQFIMSLISRTHEYQADAYAKKL-G-----YKQNCRALIDLQIK-NLST------------------ |
7 | 6ei3A | 0.09 | 0.08 | 3.21 | 0.72 | MUSTER | | AFGIPGILMFIATAVFWLGRKRYVR-VPLPPKDPHGFGAVVRSALLAHAPGQ----GRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERAAAVDGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGRASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPT-SLRRMTSGIAFSGVAWIAVGAIQVAMDGIAWQIL |
8 | 5gpjA | 0.10 | 0.08 | 3.06 | 0.89 | CNFpred | | GAVMGFLLAANGLLVLYIAINLFKIYY------GDDWGGLFEAITGYG-------------------------------LGGSSMALFGRVGGGIYTKAADVG-RNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLTAMLYPLIVSSVGILVCLLTTLFATDFFEI--KAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPT |
9 | 4aw6A | 0.19 | 0.17 | 5.51 | 0.99 | HHsearch-2 | | YFFFLVVSLVLVTIYADYIAPLFDKFTPL---PEGKLKEEIEVMAKSIDFPLTKVYVVEGSRSSHSNFKNKRIVLFDTLLEQEEV--LAVLGHELGHWKLGHTVK------NIIISQ--MNSFLC--FFLFAVLIGRFPTQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKA-----KDLYSALIKLNK-DNLGFPVDWLFSLLERLQALKTM |
10 | 5cwqA | 0.11 | 0.10 | 3.63 | 0.77 | Neff-PPAS | | AEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQG-----------------------DDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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