Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | YFALKHIHMTFAILSGLLFLVRGTWMLSGSQRLQARWVKIVPHIVDTLLLVSAIGLVVVSGQYPGQAPWLTAKLVALVGYIVLGVIALKRGRTQQVRTAAFFGALACFAYIVAVAVTKNP |
1 | 2vpyC1 | 0.12 | 0.11 | 3.86 | 1.12 | SPARKS-K | | WHWTNALHFVLVGLAGGVALLAALLHLKGDAEARRYTLYALMLIALDLFILW-----IWLFLSFHPTSPIWWGAWGLGLGFLTGGLLYLGKGQRALAWALLVFSLVALSYPGLALAV--- |
2 | 2vpyC1 | 0.12 | 0.11 | 3.86 | 1.05 | MUSTER | | WHWTNALHFVLVGLAGGVALLAALLHLKG-----DAEARRYTLYALMLIALDLFILWATHILSFHPTSPIWWGAWGLGLGFLTGGLLYLGKGQRALAWALLVFSLVALSYPGLALAV--- |
3 | 6fh1A | 0.11 | 0.11 | 3.88 | 1.04 | SP3 | | EDIVADLHTIVEQLIAQERAARQALVKTLGEDKVFRSYGILANSKEAAQCLSDVRLGIDLGYIKNVS---RNILNELMILTQPGFLQQYAGGVLRPEERDVRRAALIRERLRMETRL--- |
4 | 2vpyC2 | 0.16 | 0.14 | 4.72 | 1.04 | SPARKS-K | | NRPLWNGLMAGLFPLTALVLALGLAALLKSPWAL-FPLRVLAGASLLLALLYPLTLGHLLEEAGFW----------YGLFLLLGLGTFWQERL--APWAGLLAAAGLRALLVLAGQWQGL |
5 | 3dwwA | 0.12 | 0.12 | 4.09 | 0.99 | FFAS-3D | | --ALPAFLLCSTLLVIKMYVVAIITGQVRSDPDVERCLRAHRNDMETIYPFLFLGFVYS--FLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILW--- |
6 | 5doqA | 0.13 | 0.12 | 4.34 | 0.34 | HHpred | | TELTLTVHIIYATIPLMIAIAQWVGIRKNDMLLARRWTRGF-VITVAVGVVTGTAIGLQLSLLPISLPLFMETFAFFFEAIFLGIYLYTWDRFENKHLLLIPVAIGSSASAMFITMV--- |
7 | 5oqkA | 0.15 | 0.15 | 5.05 | 0.95 | MUSTER | | SHRFQVIIICLVVLDALLVLAELILDLKIIQPDKNNYAAMVFHYMSITILVFFMMEIIFKLFVFFHHKFEILDAVVVVVSFILDIVLLFQEHQFEALGLLILLRLWRVARIINGIIISVK |
8 | 3rkoB | 0.12 | 0.11 | 3.83 | 0.95 | CNFpred | | TPVSALIHAATMVTAGVYLIARTHGLFLM----TPEVLHLVGIVGAVTLLLAGFAALVQTDI----KRVLAYSTMSQIGYMFLALGVQ----AWDAAIFHLMTHAFFKALLFLASGSVIL |
9 | 5doqA | 0.13 | 0.13 | 4.59 | 0.83 | HHsearch-2 | | TELTLTVHIIYATIGLMIAIAQWVGIRKNDMLLARRWTRGF-VITVAVGVVTGTAIGLQLSLLPISLPLFMETFAFFFEAIFLGIYLYTWDRFENKHLLLIPVAIGSSFITMVNAFMNTP |
10 | 2vpyC1 | 0.12 | 0.11 | 3.85 | 0.99 | Neff-PPAS | | WHWTNALHFVLVGLAGGVALLAALLHLKGDA-------EARRYTLYALMLIALDLFILWAELSFHPTSPIWWGAWGLGLGFLTGGLLYLGKGSQ--RALAWALLVFSLVALSYPGLALAV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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