Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | SIPSVIVDPDEYNEVVKRLDRIDEKVEFANSEIAQRIGKKIGRDIGILYGAVTGILIFLIYISV |
1 | 6gdjA | 0.14 | 0.12 | 4.30 | 0.78 | SPARKS-K | | -----PAPLSTMQTALMRLRPVEQAVNHAITLVNTSPSSVVDALCRSLAELCLGLVQEAIDASI |
2 | 5xjjA2 | 0.10 | 0.09 | 3.45 | 0.67 | FFAS-3D | | -----LSNPKLETSVLSICLTTETLHYVISSGVAAAVSTRVSNNLGLCLWLVESAFFSILLFTF |
3 | 6gy6A2 | 0.09 | 0.08 | 2.95 | 0.35 | HHpred | | ------NLSTTIKDLQSKIDEKNKEIDQFQKDYNKYVGLA---FSGMVGGIISWAITGGIFGD- |
4 | 2bhtA | 0.19 | 0.19 | 6.05 | 0.62 | MUSTER | | SIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENTM-RELAVREGIFCGVSSGGAVAGALRVA |
5 | 1fw6A | 0.15 | 0.12 | 4.22 | 0.52 | CNFpred | | ----------EMKEKEREVYRLEALIRRREEEVFLEVRERAKRQAEALREAARILAELDVYAAL |
6 | 6gy6A2 | 0.07 | 0.06 | 2.53 | 0.36 | HHsearch-2 | | ------NLSTTIKDLQSKIDEKNKEIDQFQKDYNKYVGLAF----SGMVGGIISWAITGGIFGD |
7 | 6msqA | 0.14 | 0.14 | 4.80 | 0.78 | Neff-PPAS | | ALEELKASTAELKRATASLRAITEELKKNPSEDALVEHNRAIVEHNAIIVENNRIIAAVLELIV |
8 | 4pndA | 0.20 | 0.09 | 3.00 | 0.51 | HHsearch | | -----GNILQKIENILKKIENILWKIENILQKIE-------G---------------------- |
9 | 3hrnA | 0.19 | 0.17 | 5.56 | 0.89 | SP3 | | -----GVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAED |
10 | 2kubA | 0.12 | 0.12 | 4.38 | 0.44 | PROSPECTOR2 | | ENKLITLDAEQQLELMKSLVATQSQLEATKNLIGDPNATVADLQIAYTTLGNNTQALGNELIKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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