Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VCCDSMIPLFIDNQLSTTDGIGAITRAVQQRVQSQFNRSFEVIISESDFVVNTYYSGPRQCKFETDRYFVALY |
1 | 5fwzA | 0.07 | 0.07 | 2.85 | 1.36 | SPARKS-K | | VEVTEKFKSLVTAHNGKDEEMKDVAQDMKNYMDEKYGRVWQCVILTGSYWMHFSHEPFLSIQFRYGRHICLAW |
2 | 4ds1A | 0.12 | 0.12 | 4.32 | 1.38 | MUSTER | | KASDEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGK-NFGSYVTHEKGHFVYFYIGPLAFLVF |
3 | 5fwzA | 0.07 | 0.07 | 2.84 | 1.34 | Neff-PPAS | | -MSVPRQVEVTEKFKSKDEEMKDVAQDMKNYMDEKYGRVWQCVILTGSYWMHFSHEPFLSIQFRYGRHICLAW |
4 | 5fwzA | 0.06 | 0.05 | 2.47 | 1.65 | HHsearch | | TTMSVPRVEVTKSLVTAHEEMKDVAQDMKNYMDEKYGRVWQCVILTGSYWMHFSHEPFLSIQFRYGRHICLA- |
5 | 4ds1A | 0.10 | 0.10 | 3.51 | 1.33 | SPARKS-K | | DKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKN------FHEKGHFVYFYIGPLAFLVF |
6 | 3rjsA | 0.13 | 0.12 | 4.30 | 1.33 | MUSTER | | KNADQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGR-NFSYVTHETHH-FIYFYIGQVAVLLF |
7 | 3rjsA | 0.11 | 0.11 | 3.95 | 1.28 | Neff-PPAS | | KNADQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGR-NFGSYVTHETHHFIYFYIGQVAVLLF |
8 | 5x2dA | 0.08 | 0.08 | 3.21 | 1.54 | HHsearch | | ANMSLEDQKIAIPIAPGAEELGRLTENLKSFADKTFGGCWQVMVVDGSYWITQTFVPNMSFQFELYNRAYLF- |
9 | 3rjsA | 0.09 | 0.08 | 3.14 | 1.25 | SPARKS-K | | EDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRN------FHETHHFIYFYIGQVAVLLF |
10 | 5x2dA | 0.10 | 0.10 | 3.59 | 1.31 | MUSTER | | ISANIKIARETIPIAPGAQELGRLTENLKSFADKTFGGCWQVMVVDGSYWITQTFVPNMSFQFELYNRAYLFW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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