>PF04114 (477 residues) QGENTYAIIHAPRGDATEAIVLVAPWITADNKLNLNGVTLALTLARYFKRWSLWSKDIIF LITPDSKSGTQAWIDAYHDMHPASVQPLPLKSGALQGALVIEYPLDHRFQSLHIVYDGVN GQLPNLDLFNTAVAIAGGQMGIGANLQEMWGHDDSYEHRLQTMFRGMTKQGLGYATGAHS SFMPYHIDAITLQTKGEGWEDEMALGRTIESLCRSLNNLLEHLHQSFFFYLLMQSNRFVS IGTYLPSAMLIAGNFTIMAIALWMRTGYYPESKPSAKPKNEKASAEEKAKTDGIAERHLA LPLSLVVGLHLLGLVPLWVFNNIFHQYFTTTTYIFVVVDIILPLLLAAILSNGLGLSKPI IPQQYHLIKSFSLLLLGLSLSTLATLNFSLSFMIGLLCVPLSFVARLQGSAPFRLATSSL GLVLLNLVSPPTVLLGVCWYMGISVETVLTQAAFGWDVWGVWTQVVVWCVWWPAWLI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QGENTYAIIHAPRGDATEAIVLVAPWITADNKLNLNGVTLALTLARYFKRWSLWSKDIIFLITPDSKSGTQAWIDAYHDMHPASVQPLPLKSGALQGALVIEYPLDHRFQSLHIVYDGVNGQLPNLDLFNTAVAIAGGQMGIGANLQEMWGHDDSYEHRLQTMFRGMTKQGLGYATGAHSSFMPYHIDAITLQTKGEGWEDEMALGRTIESLCRSLNNLLEHLHQSFFFYLLMQSNRFVSIGTYLPSAMLIAGNFTIMAIALWMRTGYYPESKPSAKPKNEKASAEEKAKTDGIAERHLALPLSLVVGLHLLGLVPLWVFNNIFHQYFTTTTYIFVVVDIILPLLLAAILSNGLGLSKPIIPQQYHLIKSFSLLLLGLSLSTLATLNFSLSFMIGLLCVPLSFVARLQGSAPFRLATSSLGLVLLNLVSPPTVLLGVCWYMGISVETVLTQAAFGWDVWGVWTQVVVWCVWWPAWLI | |||||||||||||||||||
1 | 4fyeA2 | 0.12 | 0.11 | 3.94 | 0.87 | SPARKS-K | GYPGERQVFKDPMLDGKQ-VVVVNSQYDKHGRPVTGR----DTLIHRFKNSKEGEEQFIMYIPCGRY------TKRQQRLMGKDESDLVLGNSSMARMIAGTRHSDGTVTIHHDSFSGPGARMPYSDFVTLINQEEVIQTLAQRQIDRMTNLPPDAEKARAQLIKLYVEHTAGQAENQKEQFEYVRMDAITIQTGSDNSVTKNQNARFVNQMTDDVIRNLDKYDKAGALHTLLKGPQITEKENALKEVKGAYREALFSYFEEYQKG----------EGKWDQAKLDQLKNQVDGYEKSIKKQESAIYELHNQIDALRKAYYTEHKGQINLQELKEQISPVIQ----------NKETDPETKSRLQHFYNSCAYLTQAQELYYTGKNNFKLQTLMASLSCELDYANTKGSKSNNDRGQRLAQKIVGNALWTAMYTGEFLDHRRSNVEQLDRELTTIQALHHTANTGVSGGKFEIQDKA | |||||||||||||
2 | 6dz7B | 0.14 | 0.11 | 3.65 | 0.86 | FFAS-3D | --------------------------------------------------------DYVIRFNPEAIKKFEVLLLEL------------SEVG-------LQTEVRQLFVFV---------RAASKKKLKRAVYVRDWLYGVRNTEPEPASSAKPQAERLLVIYHLITVPKRHGEWKN--------VDAIF------PLHDEETNRQCMREWTEDLDRIRNTFGEHVGFY-------FAFLQSYFRFLTVVNCLWCIVFIEYWCRWQTKGVSAVHEKRAEFKPEKEIVFPATKRMYRQLLQVPFALLAAVALGAIIATCFAGYLVFIPTILVSALIPTMSAVLLTVATKLNDYENYETQDAYKVALTQKIFVVNFITSYLPIILTARLRKQVIYFTVTAQIVGFALEDYDVTDDLREMCIQFGYLALVWPLVPVSFL-------INNWVELRSDFFKICGPWLDSLGFLSWVGS--- | |||||||||||||
3 | 3guxA | 0.16 | 0.06 | 1.88 | 1.39 | HHpred | KSRNIIGAYK-P--ESKKRILLCAHWDSRP---GASGVGVLLEIARQIQKEQ-PALGIDIVFFDSEDLGSQYWARTPHV-----------QNYNARYGILLD-VGGKDA---TFYYEGYSARTARS--EKKIWKKAH-ELGYGKYFVK---------------------EDGGETVDDHIYVNKLRIPCVDIINYDNDRNTLKAVGQTV-DVIYNEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 5mz61 | 0.08 | 0.08 | 3.01 | 0.84 | MUSTER | KNVSCTVIGFAEQTAELQQEILFIAEFGVNGPIDMNSLSKLARITSYYASSEYFQGLA---YQRTACKMFITWQTLRKEACRSKDREIFASIPAKLCFFYF-----------------YNGELC-VVCLLDYIDLSD------------DTLAKEAALRWLMFLTELIEKKL-KMDKSSKDMFSATEFAMNYLKKSEYRVEMLEKLMKLRDKVKSDPTFSRYELASYVSWLCSTLSN-VPVGSALFPDRVSHIQEAALKSDSLVRNRIPGLASSQFDNSVNASIWPFLDGHQEDSNYYVHIGSTIAWHFEMRRECALVNVTTSMSAMILNLRVALKSASFFRVLQTTNTLAYYSSIIEEAGSEKNAKLMRVSCVNLL-NVCTIYPLH---SSFAAEYMMSYAIHSDFSQLSIKHFNDEFARIRERGMSSQVLMHIIQNEIFGMCVIRWLTKKLDSEDTMEIFNNALKIVRYTDMILA | |||||||||||||
5 | 6gcs5 | 0.10 | 0.08 | 2.77 | 1.17 | CNFpred | ----------------------------------IDALTITMLLAITTIS------SMVHIYSIGY-PHQVRFFSLLS--------------MFTFWMIILVTG-------------------SNYFVLFVGWEFIGVTSYLLISFWVTRLQAMKSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATAYLINTDLLVLIMLALFIAAMAKSAQF-----GLHNWLTLAMEGPTPVSSLLHAATLVTAGIYLLLRSANILEY----------------------------TPTVLFIILWIGALTTLSAGLIAICSN------DLKRIIALSTMSQLGMMTIAIGLS---------------AYNLALFHLLGHAFFKALLFMSAGSIIHSISQDIRTYGGLL--SYLPYTYICITIASLSLMAYYTKDIIIESTYGISNYVVYWIAYLSAVLTCVYSMKILYLTFYSNPNN | |||||||||||||
6 | 2zeeA | 0.12 | 0.05 | 1.72 | 1.08 | HHsearch-2 | SFSNIISTLNPT---AKRHLVLACHYDSKYGTDGAVPCAMMLELARALDKKLKPDLSLQLIFFDGEEYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN-PTFPN---FFP---NSARWFERLQAIEHEELGLLKD---HSL-EGRYFQ---------NYSYGGVIQDDHIPFLRRGVPVLHLIPSPFPWLDESTIDNLNKILQVFVLEYLHL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6cc4A | 0.07 | 0.07 | 2.83 | 1.07 | Neff-PPAS | NAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLKSLAAVSGFARDAIVARIFG------AGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFH-----------DAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACL | |||||||||||||
8 | 2zeeA | 0.12 | 0.05 | 1.72 | 1.61 | HHsearch | SFSNIISTLNPT---AKRHLVLACHYDSKYGTDGAVPCAMMLELARALDKKLKPDLSLQLIFFDGEEAGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN-PTFPN---FFP---NSARWFERLQAIEHEELGLLKDH---SL-EGRYFQ---------NYSYGGVIQDDHIPFLRRGVPVLHLIPSPFPWLDESTIDNLNKILQVFVLEYLHL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 3wajA1 | 0.09 | 0.07 | 2.75 | 1.11 | PROSPECTOR2 | SV-----------------------------------LVIAALISVKLRILNPWNSVFTVRLGGNDPWYYYRLIENTIHNFPHRIW--------------FDPFTYYPYGSYTGIIFSATSGESLRAVLAFIPLLTREVFDGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGH------------DLTARQMAYPVIAGITIGLYVWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYS-------------------PFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGAYRFLKRRSFPEMALLIWAIAMFIALWYFAAVSAVYSALALSVVFDKLHFRVAF-----ALLIALAAIYPTYILADAQSSYAGGPNKQWYDALTYDEYYLQWDYGHWIEAVANPFQA | |||||||||||||
10 | 2zeeA | 0.11 | 0.05 | 1.66 | 0.75 | SAM | -FSNIISTLNPTA---KRHLVLACHYDSKYFTDGAVPCAMMLELARALDKKLLPDLSLQLIFFDGEEAGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPT-FPNFFPNSA------RWFERLQAIEHELHELGLLKDH----EGRYF---------QNYSYGGVIQDDHIPFLRRGVPVLHLIPSPFPEHDESTIDNLNKILQVFVLEYLH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |