Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | RGTLKISEEVVAIIAGIAAMEVPGVAGMSGGIAGGIAEMLGRKNLSKGVKVEVGDKEAAIDLYIIVEYGCRIPEVSWNIQEKVKKAIETMTGLNVVEVNIHIQGV |
1 | 3w5xA | 0.21 | 0.16 | 5.13 | 1.06 | SPARKS-K | | -----SHMEAVQNRIVEAAERVPGVRGV------------------IHLRARYVGQDIWADMIIGVDPENTV-EQAHEICEAVQAAVCGKIR-RIESLHVSAEAR |
2 | 3w5xA | 0.21 | 0.15 | 4.85 | 0.85 | FFAS-3D | | ------HMEAVQNRIVEAAERVPGVRGVIH------------------LRARYVGQDIWADMIIGVDPENTVEQ-AHEICEAVQAAVCGKIR-RIESLHVSAE-- |
3 | 5ho1A | 0.19 | 0.14 | 4.62 | 0.39 | HHpred | | ----SHM-NDVLVDAYNIAKDSQHVHGVHY------------------IRGRNVGEDVHLDINIYVDADLKVFE-SDLVADAIRRKIEAEVD-HVRDVHVGVTPV |
4 | 6h9uA | 0.17 | 0.16 | 5.35 | 0.75 | MUSTER | | EGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPF--KVVEKKTKPYIQVDIGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY |
5 | 5ho5A | 0.18 | 0.13 | 4.34 | 0.71 | CNFpred | | -------MNDVLVDAYNIAKDSQHVHGVH------------------YIRGRNVGEDVHLDINIYVDADL-KVFESDLVADAIRRKIEAEV-DHVRDVHVGVTPV |
6 | 3j1zP | 0.18 | 0.14 | 4.64 | 0.48 | HHsearch-2 | | LDRE-LDE-DTRQRIKLIAKEDPRVLGLHD------------------LRTRQAGKTVFIQFHLELDGNLSLNE-AHSITDTTGLRVKAAFED--AEVIIHQDPV |
7 | 6qfjA | 0.10 | 0.08 | 2.80 | 0.89 | Neff-PPAS | | -------MEDYIEAIANVLEKTPSI------------------SDVKDIIARELGQVLEFEIDLYVPPDIT-VTTGERIKKEVNQIIKEIVD-RKSTVKVRLFAA |
8 | 3byrA | 0.09 | 0.07 | 2.57 | 0.74 | HHsearch | | -MDEGL-PPEEVERIRAFLQERGRALEVHD------------------LKTRRAGPRSFLEFHLVVRGDTPVEE-AHRLCDELERALAQAFPG--LQATIHVEP- |
9 | 3w5xA | 0.16 | 0.11 | 3.82 | 0.99 | SP3 | | --------------------------SHMEAVQNRIVEAAERVPGVRGLRARYVGQDIWADMIIGVDPENT-VEQAHEICEAVQAAVCGKIR-RIESLHVSAEAR |
10 | 3w5xA | 0.20 | 0.15 | 4.88 | 0.60 | PROSPECTOR2 | | S-----HMEAVQNRIVEAAERVPGVRGVI------------------HLRARYVGQDIWADMIIGVDPENTVEQ-AHEICEAVQAAVCGKIR-RIESLHVSAEAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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