Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | RETPEWLVNLMIEENGFDAKLIIEKELTQTDVSRQQNRLLIPVNKIENKDFLNEEEKRNIMAHHVKHRDTGVDVTFVGSNRQQCKLNLRRWDMNNSSNYVLVSGWF |
1 | 5os9A | 0.26 | 0.19 | 5.81 | 1.52 | SPARKS-K | | ----------------ADREHMFDKVVTPSDVGKL-NRLVIPKQHAERFFPLDS-----------SSNEKGLLLNFEDLTGKSWRFRYSYWN--SSQSYVMTKGWS |
2 | 6j9cA | 0.20 | 0.14 | 4.54 | 0.91 | FFAS-3D | | --------------DNKKLRVLCEKELKNSDVG-SLGRIVLPKRDAEANLPKL-------------SDKEGIVVQMRDFSMQSWSFKYKFWSNNKS-RMYVLENT- |
3 | 1widA | 0.30 | 0.22 | 6.58 | 1.39 | HHpred | | ----------------RSAEALFEKAVTPSDVGK-LNRLVIPKHHAEKHPLPSSN-----------VSVKGVLLNFEDVNGKVWRFRYSYWN--SSQSYVLTKGWS |
4 | 6j9cA | 0.23 | 0.17 | 5.31 | 1.57 | MUSTER | | --------------DNKKLRVLCEKELKNSDVGSL-GRIVLPKRDAEAN-LP------------KLSDKEGIVVQMRDVSMQSWSFKYKFWSNNKSRMYVLE-NTG |
5 | 5os9A | 0.27 | 0.19 | 5.80 | 1.16 | CNFpred | | -----------------DREHMFDKVVTPSDVGK-LNRLVIPKQHAERFFPLDSSSN-----------EKGLLLNFEDLTGKSWRFRYSYWNS--SQSYVMTKGWS |
6 | 5o63A | 0.13 | 0.11 | 3.94 | 1.52 | HHsearch-2 | | NELIKYAKELVRSAGKTKSAAMFAKVLTPNDDSG-RHGVLVPTEAYSFFPDMPISDPS--------QNATSNFPAFDSLSKTHKTLAYKYYE--RYPERRIT-RMH |
7 | 5os9A | 0.28 | 0.20 | 6.06 | 1.78 | Neff-PPAS | | -----------------DREHMFDKVVTPSDVGKL-NRLVIPKQHAERFFPL-----------DSSSNEKGLLLNFEDLTGKSWRFRYSYW--NSSQSYVMTKGWS |
8 | 5o63A | 0.13 | 0.11 | 3.93 | 2.40 | HHsearch | | NELIKYAKELVRSAGKTKSAAMFAKVLTPNDDSGR-HGVLVPTEAYSFFPDMPISDPS--------QNATSNFPAFDSLSKTHKTLAYKYYE--RYPERRIT-RM- |
9 | 4ldvA2 | 0.11 | 0.08 | 2.75 | 0.78 | PROSPECTOR2 | | T------------------VHSFCKTLTASDTS-THGGFSVLRRHADDCLPPL----------DMSQQPPWQELVATDLHNSEWHFRHIFR--GQPRRHLLTTGWM |
10 | 5o63A | 0.13 | 0.09 | 3.25 | 0.70 | SAM | | -----------------KSAAMFAKVLTPNDDS-GRHGVLVPTEAYSP--DMPISDPSQ--------NATSNFPAFDSLSKTHKTLAYKYY--ERYPERRIT-RMH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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