Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VRGACAIVFGILAIIWPLITLLTLVILFGIFAIVSGIFTLIGAFRGDHPRQSKLWMIVSGVLGIIAGVIA |
1 | 5x5yG4 | 0.13 | 0.13 | 4.47 | 1.10 | SPARKS-K | | LVTAALVLMAISFIFGPLRVTLGQRIFTGVLVGFVFRIAQDLLSLVFDFPPLLAVVIPASICALAGVWLL |
2 | 5x5yG4 | 0.14 | 0.14 | 4.86 | 1.43 | MUSTER | | LVTAALVLMAISFIFGPVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWL |
3 | 3jbrE | 0.13 | 0.13 | 4.46 | 1.07 | SPARKS-K | | RVTLFCILVGIVLAMTAVVEYSISAAAISVFSLGFLIMGTICALMAFRK-KRDYLLRPASMFYVFAGLCL |
4 | 3ir7C | 0.12 | 0.11 | 4.06 | 0.69 | FFAS-3D | | --GILGIFVGHFFGMLTQKMAMFAGGASGVLCLIGGVLLLKRRLFSPTTTGADILILSLLVIQCALGLLT |
5 | 5sv9A1 | 0.15 | 0.11 | 3.84 | 0.19 | HHpred | | -----------------TFPCDIFGLFINVVYIQKGIQILTRQFHNTSSVQDGFASVVVALVMTAFGLFF |
6 | 5dn6J | 0.06 | 0.06 | 2.53 | 1.21 | MUSTER | | GQLGQYLGAGLACVGM-AGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLL |
7 | 5ezmA | 0.07 | 0.07 | 2.93 | 0.76 | CNFpred | | RAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILT |
8 | 5sv9A1 | 0.15 | 0.11 | 3.84 | 0.46 | HHsearch-2 | | -----------------TFPCDIFGLFINVVYIQKGIQILTRQFHNTSSVQDGFASVVVALVMTAFGLFF |
9 | 5ezmA3 | 0.09 | 0.09 | 3.29 | 0.95 | Neff-PPAS | | IVAACGLLASPVVATIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRG--VLPSVAVYAMGMYLGFTVA |
10 | 5edlA | 0.14 | 0.14 | 4.84 | 0.49 | HHsearch | | IMSVISIVFAVVYLLFTHFGNVLAGFGPIAYEPIYGIWFIIAAYMIRKPGAALVSEIIAALVECLLGNG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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