Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | QPRGVDALKQHVILNKIDTALWASRVLTIIFAIGYVIPIFGNPTNAYYKVLMANAATSALRLHQRMPAPQFSRAYLQQLLLEDSCHYLLYSLIFLYAYPVLLIIFPVTLFAVLHSASYSLTLLDTLGQNSWWGARLLISLVEFQTRNILRLAAFAEIFIMPLAVVLVFLGKAGIMTPLVYYQFLVLRYSSRRNPYTRNVFYELRLVTDNFANGARTPPFVRKVLQSSVSFVSRLAPP |
1 | 5v6pA | 0.10 | 0.09 | 3.44 | 1.16 | FFAS-3D | | -------LAIFVVVTYLLTFYCVYSATKFLQVTLKLNE---GFNLMVLSIFILLNSTLLWQLLTKLLFGELRLIEHEHIF--ERLPFTIINTLFMSSLFFFTVAFFGLLLLYLKVFHWILKDRLEALLQSINDSTTMKTLIFSRFSFNLVLLAVVDYQIITRCISSIYDIESTSLYLIQVMEFTMLQTCLNSGKFMYEKAIDVFTRFLKTALPFRMPMLLKDVVWDILALYQSG--- |
2 | 3rkoC | 0.10 | 0.10 | 3.55 | 1.03 | CNFpred | | GKTRITAATKFFIYTQASGLVMLIAILALVFVHYWTFNYEELL-GVEYLLMLGFFIAFAVKMPV-------LHGWLPDAHSQA-PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG---VIGIFYGAWMAFAQ-TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA----AGLFILCGQLYERIHTRDMMGGLWSKMKWLPALSLFFAVATLGM |
3 | 1vt4I3 | 0.09 | 0.05 | 1.78 | 1.00 | HHsearch | | -----------------------------------------------------------------------------------------------------EYALHRSIVDHYNIPKTFDSD-DLIPPYLQYFYSHIGHHLK--------NIEHPERMTLFRMVFLDFRFKNASGSILNTLQQLKKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIIFEEAHKQVQR- |
4 | 5cwiA | 0.11 | 0.10 | 3.50 | 0.88 | SPARKS-K | | AREARSKAEELRQRSQAARDAQKLASQAEEAVKLACELAQEHKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELAQEHPNADIAKLCIKAASEAAEAASKAAELAQRHPDSQ--AARDAIKLASQAAEAVKLACELAQEH-----------PNAD---------------IAKKCKAASEAAEEASKAAEEAQRHPDS-QKARDEIKEASQKAEEVKER |
5 | 5v6pA2 | 0.10 | 0.08 | 2.93 | 1.09 | FFAS-3D | | --------------RLIEHEHIFERLPFTIINTLFMSSLFHERYFFTVAFFGLLLLYLKVF----------------HWILKDRLEALLQTMKTLIFSRFSFNLVLLAVVDYQIITRCISSIYTNQKSDIE--------------STSLYLIQVMEFTMLLIDLLNLF--------LQTCLNFWEFYRSQQSGKFMYEKAIDVFTRFLKTALPFRMPMLLKDVVWDILALYQSG--- |
6 | 5tj5A | 0.13 | 0.11 | 3.94 | 0.41 | HHpred | | ----TENALLFSNSYKMKILMGFIHMTY--SYFFSLADIIGIPGLL----FMQGIFGYLSCIVYKWAVDWPGLNMLINMFPQAKVQVFL-LLMALVCIPWLLLVKPIMIHQVIHTIEFCLNCVSHTASYLWALSLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMW----FALTCAVLVLMEGTSAMLHSLRLHWVESMSK-------PYEPFAFEYKDMEV---------- |
7 | 5y50A | 0.09 | 0.09 | 3.49 | 0.74 | MUSTER | | GAKQYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWSLVFKFGIAIGVSYWLNVTVLGLYMTFSSSCSKSRATISMSLFEGMGEFFRFGIPSASMICLEWWSFEFLVLLSGILP-NPKLEASVLSVCLSTQSSL--YQIPESLGAAASTRVANELGAGN-PKQARMAVYTAMVITGVESIM |
8 | 5lnkL | 0.12 | 0.11 | 3.87 | 0.95 | CNFpred | | RTDANTAALQAILYNRIGDIGFILAMAWFLINLWDLQQIF-DSNLPLMGLILAATGKSAQFG---------LHPWLPSAME---GPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFGQSIMLCLG---AMTTLFTAMCALTQ-NDIKKIIAFSTSSQLGLMMVTIGINQLAFLHICTHAFFKAMLFM-----CSGSIIHSLEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFL |
9 | 1vt4I3 | 0.09 | 0.05 | 1.79 | 0.93 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------EYALHRSIVDHYNIPKTFDSD-DLIPPYLQYFYSHIG----HH----LKNIEHPERMTLFRMVFLDFRFWNASGSILNTLQQLKKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIIFEEAHKQVQRG |
10 | 3ea5B2 | 0.07 | 0.07 | 2.82 | 0.83 | Neff-PPAS | | KKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVSPVSITAVGFIADISNSLEEDFRYSDAMMNVLAQMISRRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLKPEALFPYVGTIFQFIAQVAEATSRAAVGLIGDIAAMFPDGSIKQFYGDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQLSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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