Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | DITYGIPAEVWPRDYSNVEKALMFWRKSLIPVRVTMEDGQVFCMYVQGLMSSRNKVDLCPAPFDKENRIRLPLERISTIESGVTEGIAHDFTGRTTVHPDYVDNRPSRRDFFKICRQAHEMQKSIRVYMADGREIEGGSSGVDACQATLNMGDGRKTVVMFDWVERI |
1 | 5mkl14 | 0.14 | 0.11 | 3.68 | 0.61 | SPARKS-K | | ----------------KIENPLKSLKTLNKIVLVKLKNGEEYVGRLEQSDGTMNDCTEYREGTSDPVRVLIRGSNILFISI----------------DYESIMIENPLKSLKTA------LNKIVLVKLKNGEEYVGRLEQSDLKDCTEYREGTAKYGRVLIRGSNI |
2 | 5mkl11 | 0.17 | 0.13 | 4.15 | 0.65 | FFAS-3D | | ------------------ENPLKSLKTANKIVLVKLKNGEEYVGRLEQSDGTMNLVLK------------------DCTEYREGTSDPVAKYGRVLIRGSNYESIMKIENPLKSLKTA--LNKIVLVKLKNGEEYVGRLEQSDLKDCTEYREGTSDPVAKYGRV--- |
3 | 5mkl14 | 0.17 | 0.13 | 4.15 | 0.31 | HHpred | | ----------------KIENPLKSLKALNKIVLVKLKNGEEYVGRLEQSDGTMN-LVLKDCTYREGTS-----DPVAKYGRVLIRG-----SNILFISIDYESIMI--ENPLKSLKTAL--NKIVLVKLKNGEEYVGRLEQSDGTM-NLVLREGSDPV--------- |
4 | 4mboA2 | 0.09 | 0.08 | 3.17 | 0.72 | MUSTER | | NSP--SVTEHTNVKTNVRSRIMKLDDERQTETYITQINPEGKEMYFA--SGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEDVTSQYSYTNDGSKITIDWKTNSISSTTSVLVKIPQSGVLYSTVSDINQYGSKYSYGHTN------------ |
5 | 3lx1A | 0.11 | 0.07 | 2.59 | 0.87 | CNFpred | | ---------------EVLKEGIKDASLVSDAIKFIAK-ENEFTMKAEGET-NEVEIRLTLE---DEGLLDLEVEEETKSAYGI-------------------------RYLSDMVKGIGK-ADEVILRFGNE----------MPLQMEYMIR--DEGRLTFLLAPRV |
6 | 5mkl11 | 0.15 | 0.11 | 3.63 | 0.56 | HHsearch-2 | | ------KI-ENPL---KSL-----KTALNKIVLVKLKNGEEYVGRLEQSDGTMN-LVLKDCTYREGT-----SDPVAKY-------------GRVLIRGSNYESIMKIENPLKS--LKTALNKIVLVKLKNGEEYVGRLEQSDGTM-N---------LVLKDCTEYR |
7 | 3ewkA | 0.06 | 0.06 | 2.56 | 0.76 | Neff-PPAS | | -HRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVDSTIVPLMSEMILLTDR----AGRIIYANPALCRFSGMAEGELLGQSPSILDSPL---ADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD- |
8 | 5mkl14 | 0.16 | 0.12 | 3.99 | 0.78 | HHsearch | | ----------------KIENPLKSLTALNKIVLVKLKNGEEYVGRLEQSDGTMN-LVLKDCT-----------------EYREGTSDPVAKYGRVLIRGSNIYESIMIENPLKSLK--TALNKIVLVKLKNGEEYVGRLEQSDGTDCTEYREGSDKYGRVLI---R- |
9 | 5mkl11 | 0.16 | 0.13 | 4.18 | 0.93 | SP3 | | ----------------KIENPLKSLKTLNKIVLVKLKNGEEYVGRLEQSDGTMN-LVLKDREGTSDPVAKYGRVLISNILFISI-------------DYESIMKIENPLKSLKTA-----LNKIVLVKLKNGEEYVGRLEQSDGKDCTEYREGTSDPVAKYGRVL-I |
10 | 3ewkA | 0.10 | 0.10 | 3.74 | 0.62 | PROSPECTOR2 | | LVSSRYGRENSGYHGKAYIRDMWRTISRGNIWQGEFKDGTRYDSTIVPLMDNAGKPRIRRDITAQKEAEAQLARLKQAMDANSEMILLTDRAGRIIQSPSILDSPLADQETLAAMQEALQAGQPLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYV-QIQHD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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