Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KQITNLVGNLLQQGAKASNITRIMTEINDRIVRKIIQFAEREFGPPPVPYCWIALGSEGRKEQTFKTDQDNALIYADPMAEQEDSVRKYFLEFTNYVKESLLKCGFPPCPGDIMASNPKWCQPFKAWKKYFSQWIYTPKG |
1 | 3k7dA | 0.14 | 0.14 | 4.64 | 1.39 | SPARKS-K | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMGEREIDGRQFYLRLAQRIMHLFSEVDARLRPSG---AAGMLVTSAEAFADYQKNEAWTWEH |
2 | 3k7dA2 | 0.13 | 0.13 | 4.44 | 1.78 | FFAS-3D | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPDGEREIDGRQFYLRLAQRIMHLFSEVDARLRPSG---AAGMLVTSAEAFADYQKNEAWTWE- |
3 | 3k7dA | 0.16 | 0.15 | 5.01 | 2.03 | HHpred | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVRYGKPGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAREIDGRQFYLRLAQRIMHLFSTRGIRLRPSG---AAGMLVTSAEAFADYQKNEAWT--- |
4 | 3k7dA2 | 0.14 | 0.14 | 4.64 | 1.18 | MUSTER | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAREIDGRQFYLRLAQRIMHLFSTRGILLRPSG---AAGMLVTSAEAFADYQKNEAWTWEH |
5 | 1v4aA | 0.12 | 0.11 | 4.04 | 1.15 | CNFpred | | RIMVRIAWAQTLALVTEESILQQLSYLAETLIVAARDWLYDACC-EAQPLLILGMGKLGGGELNFSSDIDLIFAWPE----RELDNAQFFTRMGQRLIKVLDQPGFVYRVD-PFGESGPLVLSFAALEDYYQEQGRDWER |
6 | 3k7dA2 | 0.15 | 0.15 | 5.03 | 2.66 | HHsearch-2 | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQYGKPNRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAREIDGRQFYLRLAQRIMHLFSTRGIRLRPSG---AAGMLVTSAEAFADYQKNEAWTWEH |
7 | 3k7dA2 | 0.13 | 0.13 | 4.45 | 1.31 | Neff-PPAS | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPDGEREIDGRQFYLRLAQRIMHLFSTRTARLRPS---GAAGMLVTSAEAFADYQKNEAWTWEH |
8 | 3k7dA2 | 0.15 | 0.15 | 5.02 | 4.10 | HHsearch | | AQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQYGKPNRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAREIDGRQFYLRLAQRIMHLFSTRGIRLRPSG---AAGMLVTSAEAFADYQKNEAWTWE- |
9 | 3k7dA2 | 0.13 | 0.13 | 4.45 | 1.02 | PROSPECTOR2 | | FPLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDEREIDGRQFYLRLAQRIMHLFSTRTARLRPSG---AAGMLVTSAEAFADYQKNEAWTVVY |
10 | 3k7dA2 | 0.15 | 0.15 | 5.02 | 1.67 | SAM | | -QLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMGKPNRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAREIDGRQFYLRLAQRIMHLFSTRGILYRPSG---AAGMLVTSAEAFADYQKNEAWTWEH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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