Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | VVYVDILFIVNLLINYMLLWTTGKISKKQMSVIRLLIGSLIGAIYAVIMFFPAFKIYYTVIAKIIFSMALIAITFNIEKVKDFFRVLAIFYVVSFTFGGTALGLFYFTNVGAFIGAILSNGVIYFTLPWKVLVISSFIAYIIIRITWQVFYKKISKENMFIPLLIMFDNKSICVNALIDTGNSLYDPISNFPVVVVEFQAIKDLLPEDIQKIFNECSENDLSLISKIMSNSVWISRFRLIPFSSLGKENGMLIGFKPDEIEIIEGEHKKDIKDIIVGIYNKRLSKDETYKALLNPEI |
1 | 5ezmA | 0.06 | 0.05 | 2.01 | 0.93 | SPARKS-K | | WTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLALNANSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGV-------------LPSVAVYAMGMYLGFTVALLGHETVGRPASTPEMPL---YGVQ---------------MLDHYLRHPLMMVGADELTFGAVDSFTKLWKNGQPAMSPDTYLALAPTYVVWRRVVVANVASLAGPQ----------------------------------------------- |
2 | 4jq6A | 0.19 | 0.08 | 2.71 | 0.67 | FFAS-3D | | --YIDWLITVPLQIIEFYLII--------AVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLFNTIKWIVTVGWAIYPIGYAWGY-------------------FGDGLNEDALNIVYNLADLINKAAFGLAIWAAAMKDKETS------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1fmbA | 0.14 | 0.04 | 1.48 | 0.33 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------NLEKRP--TTIVLINDTP--LNVLLDTGADT---------SVLTTAHYNRLKY----------------------RGRKYQ------G-TGIGGVGGNVETFS-TPVTIKKKGRHI-KTRMLVA--DIPVT-------ILGRD- |
4 | 5do7B2 | 0.09 | 0.07 | 2.70 | 0.75 | MUSTER | | NDF--PTLLIHGAEACLMSMTIGFLYFGHGSIQ-LSFMDTAALLFMIGALIPFNVILDVISKCYSERAMLYYELEDYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLR----PGLQPFLLHFLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNSFYLA------------GG-----NLSSLW--CFEGLMKIQFSRRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIY---------LIVIGL------------------YYVSLRFIKQKPSQDW-------- |
5 | 4he8G | 0.12 | 0.06 | 2.15 | 0.91 | CNFpred | | --LADALGTLYKVGVFAFFRFAIPLAPEGQAQGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGT-YRGLAQSAPGLAALALILFLAMVGSGFPGEFLTLLGAYKAS---------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5yq8A | 0.06 | 0.02 | 0.87 | 0.53 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------------------------------------------------------AKVTMLYVPCTINQV--LVKAFVDSGAQN---------SIMNKRTAERCGLMRL-------V------------DVRMRG----V-AVGVGR---QEICGRIHMTPVNLAGMYIP---FAFYVIED-----QAMDLIIGLDQ |
7 | 5tgzA | 0.09 | 0.09 | 3.35 | 0.97 | Neff-PPAS | | AVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVLFKLGGVTASFTASVGSLFLAAIDIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFP---HIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAVAKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAAAGGLFEGFDLVLLGCSTWGDDSIFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGA |
8 | 2i1aB | 0.13 | 0.04 | 1.28 | 0.43 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------TQVPMLYINIEINNY--PVKAFVDTGAQT---------TIMSTRLAKKTGLSR-----------------------M-IDK-------KI---IGRI-----HQAQVKIETQY---IPCSFTVLD------TDIDVLIGLD- |
9 | 5ezmA | 0.07 | 0.06 | 2.44 | 0.99 | SP3 | | SVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVAL-DRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVASVAVYAMGMYLGFTVALLGHETVGRPASGADIAPQIPLYGVQM--------------LDHYLRHPLMMVELTFGATVEPDSFTKLWKNGQPASPDTYLALAPTLSM-------------------------YVVARDWRRVVVANV------ASLAGPQ----------- |
10 | 3rceA | 0.09 | 0.09 | 3.45 | 1.00 | PROSPECTOR2 | | ELFESIILYMSTFFASLIVVPIILIAREYKLTTYGFIAALLGSIANSYYNRTMSGYSYSLNFAMIGLFGLYTLVFHRKEKIFYLAIALMIIALKLALIVLLFAIFAFKEEKINFLHLSGGAFMYFNVNIYAVPVMALGFGYFLYAFFNFLEKKQIKLSLALMHIYYYKSSTVFTSYEASILNDLKNKAQREDYVVAEQIPAANMAPDVLKAMVKDYNQTSAKDFLESLNDKNFKRDVYIYQANAIAQDGSVMVEIINDFRALKVEGASIPLKAFVDIESITNIDSKAQIYLLFLREY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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