>PF03419 (297 residues) VVYVDILFIVNLLINYMLLWTTGKISKKQMSVIRLLIGSLIGAIYAVIMFFPAFKIYYTV IAKIIFSMALIAITFNIEKVKDFFRVLAIFYVVSFTFGGTALGLFYFTNVGAFIGAILSN GVIYFTLPWKVLVISSFIAYIIIRITWQVFYKKISKENMFIPLLIMFDNKSICVNALIDT GNSLYDPISNFPVVVVEFQAIKDLLPEDIQKIFNECSENDLSLISKIMSNSVWISRFRLI PFSSLGKENGMLIGFKPDEIEIIEGEHKKDIKDIIVGIYNKRLSKDETYKALLNPEI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | VVYVDILFIVNLLINYMLLWTTGKISKKQMSVIRLLIGSLIGAIYAVIMFFPAFKIYYTVIAKIIFSMALIAITFNIEKVKDFFRVLAIFYVVSFTFGGTALGLFYFTNVGAFIGAILSNGVIYFTLPWKVLVISSFIAYIIIRITWQVFYKKISKENMFIPLLIMFDNKSICVNALIDTGNSLYDPISNFPVVVVEFQAIKDLLPEDIQKIFNECSENDLSLISKIMSNSVWISRFRLIPFSSLGKENGMLIGFKPDEIEIIEGEHKKDIKDIIVGIYNKRLSKDETYKALLNPEI | |||||||||||||||||||
1 | 5ezmA | 0.06 | 0.05 | 2.01 | 0.93 | SPARKS-K | WTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLALNANSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGV-------------LPSVAVYAMGMYLGFTVALLGHETVGRPASTPEMPL---YGVQ---------------MLDHYLRHPLMMVGADELTFGAVDSFTKLWKNGQPAMSPDTYLALAPTYVVWRRVVVANVASLAGPQ----------------------------------------------- | |||||||||||||
2 | 4jq6A | 0.19 | 0.08 | 2.71 | 0.67 | FFAS-3D | --YIDWLITVPLQIIEFYLII--------AVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLFNTIKWIVTVGWAIYPIGYAWGY-------------------FGDGLNEDALNIVYNLADLINKAAFGLAIWAAAMKDKETS------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 1fmbA | 0.14 | 0.04 | 1.48 | 0.33 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------NLEKRP--TTIVLINDTP--LNVLLDTGADT---------SVLTTAHYNRLKY----------------------RGRKYQ------G-TGIGGVGGNVETFS-TPVTIKKKGRHI-KTRMLVA--DIPVT-------ILGRD- | |||||||||||||
4 | 5do7B2 | 0.09 | 0.07 | 2.70 | 0.75 | MUSTER | NDF--PTLLIHGAEACLMSMTIGFLYFGHGSIQ-LSFMDTAALLFMIGALIPFNVILDVISKCYSERAMLYYELEDYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLR----PGLQPFLLHFLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNSFYLA------------GG-----NLSSLW--CFEGLMKIQFSRRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIY---------LIVIGL------------------YYVSLRFIKQKPSQDW-------- | |||||||||||||
5 | 4he8G | 0.12 | 0.06 | 2.15 | 0.91 | CNFpred | --LADALGTLYKVGVFAFFRFAIPLAPEGQAQGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGT-YRGLAQSAPGLAALALILFLAMVGSGFPGEFLTLLGAYKAS---------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5yq8A | 0.06 | 0.02 | 0.87 | 0.53 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------AKVTMLYVPCTINQV--LVKAFVDSGAQN---------SIMNKRTAERCGLMRL-------V------------DVRMRG----V-AVGVGR---QEICGRIHMTPVNLAGMYIP---FAFYVIED-----QAMDLIIGLDQ | |||||||||||||
7 | 5tgzA | 0.09 | 0.09 | 3.35 | 0.97 | Neff-PPAS | AVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVLFKLGGVTASFTASVGSLFLAAIDIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFP---HIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAVAKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAAAGGLFEGFDLVLLGCSTWGDDSIFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGA | |||||||||||||
8 | 2i1aB | 0.13 | 0.04 | 1.28 | 0.43 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------TQVPMLYINIEINNY--PVKAFVDTGAQT---------TIMSTRLAKKTGLSR-----------------------M-IDK-------KI---IGRI-----HQAQVKIETQY---IPCSFTVLD------TDIDVLIGLD- | |||||||||||||
9 | 5ezmA | 0.07 | 0.06 | 2.44 | 0.99 | SP3 | SVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVAL-DRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVASVAVYAMGMYLGFTVALLGHETVGRPASGADIAPQIPLYGVQM--------------LDHYLRHPLMMVELTFGATVEPDSFTKLWKNGQPASPDTYLALAPTLSM-------------------------YVVARDWRRVVVANV------ASLAGPQ----------- | |||||||||||||
10 | 3rceA | 0.09 | 0.09 | 3.45 | 1.00 | PROSPECTOR2 | ELFESIILYMSTFFASLIVVPIILIAREYKLTTYGFIAALLGSIANSYYNRTMSGYSYSLNFAMIGLFGLYTLVFHRKEKIFYLAIALMIIALKLALIVLLFAIFAFKEEKINFLHLSGGAFMYFNVNIYAVPVMALGFGYFLYAFFNFLEKKQIKLSLALMHIYYYKSSTVFTSYEASILNDLKNKAQREDYVVAEQIPAANMAPDVLKAMVKDYNQTSAKDFLESLNDKNFKRDVYIYQANAIAQDGSVMVEIINDFRALKVEGASIPLKAFVDIESITNIDSKAQIYLLFLREY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |