Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MKNTYLYHNYSYGWIPETSIWSSRFANLDVTDYYPITINLLKKFEFMMALYKGPILPYEEKINTEFISKGSFYGRYINFLRNFSILPTNEFISFLLLTSIPIYNILFWFKSTQFDIKKHTLFSEVYSNNDRHIELAKYFRQSGDYKPLFSRLKEDNIYTQPFPLNTSRILHQNLPNSSTISDYETLSNLSAILYLTNYDPVLMFLVFYVPNISVTTKITPGVEYLMKKLNMDKKDITLI |
1 | 5mz61 | 0.11 | 0.10 | 3.49 | 0.58 | SPARKS-K | | DTLAKEAALRWLMFLGETELIEKKLKTWKMDKS---SKDMFSATEFAMNYLKKS-----EYRVE-------MLEKLMKLRDKVKSDPTRSFSRYELASYVSWLCSTLSNVPVGSALRECEFPDRVSHIQEAALKSDSLVRNRI---PGLAS------SQFDNSVNASIWPFLDGH-QEDSNYYVHIGSTIAWHFEMRRECALVNVTTAQTRDSMSAMILNLRVALKSASFFRVLQTTNT |
2 | 1w6jA2 | 0.14 | 0.10 | 3.60 | 0.57 | FFAS-3D | | --------NGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLS------QVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKA---VLLLQEKCPHVTEHIPRERL--------CDAVALLNMRNPDGGF----------ATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQ------ALKYFHKRFPEHEIRETLTQGLEFCRRQ----------- |
3 | 4bndA | 0.15 | 0.11 | 3.67 | 0.34 | HHpred | | -------------------------FDIDNTPKMPIFPEMAELLAT---LSQ--------K-YIIAP----ISGQKYDQFLIIINLPESA-----NLDNFHVAQGT-----QYYAHKAKQVFN-YALTDEQANAIMGALEKAAKELGHW---DESLLPGDEIENRESMIAYSAIG-QKAGV--------EAKQAWD-PDMIAKLASQYAPEFEFEINGFVGMNHLMEELNVTKEEILYF |
4 | 4perA2 | 0.11 | 0.10 | 3.49 | 0.56 | MUSTER | | FQGMDLD-EEINPRWAELLSTMKSCSTIRLDDCN-LSSSNCKDLSSIIHTN--------PSLKELKLNNNELGDAGIEYLCKGLLTPSLQKLW--LLTSASCETLRSVLSAQPS----TELVGDNKLGTAGVKVLCQGLMNPNCKQKL--QLEYCELTADIVEALNAALQAKPTLKELSLSNDTAVKQLCRGLVEASCD--LELL--HLENCGITSDSCRDISAVLSSKSLLD-A---- |
5 | 3gdeA | 0.11 | 0.08 | 3.02 | 0.72 | CNFpred | | ---------------------------------------FAEFAEFCERLEKIS-------STLELTA------RIAAFLQKIE--DERDLYDVVLFIT---GKVYPPWDERELGVGIGLLYEALENVSVKRSEIESMIREYGDLGLVAEQLIKKKKMLAFEELTVRKVRETFASLTGEGSMKRKIMLLTGLYGLATPLEARYLTRLILNEMRLGVGEGIMRDAIARAFRADPETVERA |
6 | 2pffB | 0.18 | 0.17 | 5.61 | 0.54 | HHsearch-2 | | LSHGSLEHVLLV----PTASFASQQEQFNKADDEPTTPELVGKFLGYVSSLVSKVGQFDQVLNLCLTEFENCYLEGNDLAAKLLQVKTKELIKNYITARIMASNSALFRAVGEGNAQLVAIFGGQGNTDDYHVTLSELIRTTLDAEKVFTQGENPNTPDKDYLLS-IPISCP-LIGVIQLAHYVVTAKLLTAVAIAETDSAITVLFFIYPMLSISNLTQEQVQDYVNKLPAGKVEISLV |
7 | 4q7qA | 0.07 | 0.06 | 2.65 | 0.57 | Neff-PPAS | | --ITYLNDHLDETGNRVSKGYLTRLNELPNLKYINQGHNGWTSGGIAGNIDSLGWWQGRPVGKLDDYQHDNGNTTVYGSFRIIISKIRQLNPEAKIVLITPQRNDFVYIADAKNNAFGSYQKKNGQTLEEFANAVLTIGRYEQI--PVVDLYHHPLLTLRNVKFKHLKNPKNGKYVNYKYPAFVNIPFNPENNEYPYPPAAVNLTYDGLPSDKGNAIIASALADVFRQLGLS------- |
8 | 3pmiA2 | 0.20 | 0.05 | 1.47 | 0.45 | HHsearch | | ----------------------------DCK----------EK----QTLLNQAREDFNQDIGRVRLGCGSFAGSFLEYYAADISYPVRKSIQQDVL---------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2iwzA | 0.09 | 0.09 | 3.31 | 0.66 | SP3 | | LVGEEYKSIPCSAYVPRG----SDEGQFNEQNFVKSDIKSMSSPTIMAIGAAG----WHPQSEADQVATGVAIGMGMIPLEVVSE--TALNFQTKGYNKVSPFFVPKILVNMAAGSIRYKLKGPNHAVSAHAVGDSFRFIAHGDADLSLAGFSRARALSTNSDPKLACRPFHPKRDGFVMGEV--LEEYEHAVQRR--ARIYAEVLGYAGHITAPDPEGEGALRCMAAAGVQPEEISYI |
10 | 1feza | 0.08 | 0.07 | 2.60 | 0.69 | PROSPECTOR2 | | KIEAVIVDYGCF--------------------------APLEVFMEIFHKRGVAITAPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPLGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH-------FTIETMQ-------ELESVMEHIE--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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