Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MDHNKYLLTIFLEDNESFFKYISEQDDETAMSDIENIVNYLDFLLLLLIKSKDKLESIGYFYEPLSEEYRSLIDFSDMKNFRVLYNRIPINVTPESSIELNKGYLSDFVISLMRLKKEFKGSDSVTKTITYIDPRKDISFSNILSILN |
1 | 2ejnA | 0.08 | 0.07 | 2.66 | 0.62 | SPARKS-K | | CPAVKRDVDLFLTGTDEYVEQVAQYALPVVLENARILKNCVDAKMENALSLLDKIYTSPCVKMIFYDVFFAVAN-GNELLLDLSLTKV--NATE---------PERTAMKKIQDCYVENG-------------LISRVLDGLVMTTIS |
2 | 2chnA4 | 0.13 | 0.10 | 3.51 | 0.58 | FFAS-3D | | -------IQPAA---ERFLKAFKEGKDKADFETLQYIVEITPWVFKLTAEGEEVLKVEGRNESYFLRKYNHVKALQQQFYIDQTSNQ----NPYQPGVKTATRVIKPLIDRTFFFNQKFNAH--LDATTDY----------------- |
3 | 2ycuA | 0.13 | 0.11 | 3.77 | 0.37 | HHpred | | ---LQPCIDLIERNPPGLLALLDEETDKSFVEKVAQ----------EQGGHRPRHDSVLHDYDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQRRGMFRTVGQLYKESLSRLMATLSNT--NPSFVRCIVPNHEKRAG------- |
4 | 4r6iA | 0.14 | 0.14 | 4.61 | 0.62 | MUSTER | | KSLNLQICEELVFKKNS--QSLAQKQVGALYPIINQINYDIQSSLNIISGREQDVRVFLRLYCNIPNDYWPFPYI-NKQNITDLINKEILNVQYTYSKH---KLCVLFAITISRLLSGNTIDNVSGLILVNKNDDHYKTVASITSELQ |
5 | 4k6jA | 0.09 | 0.08 | 3.11 | 0.57 | CNFpred | | ------GLDHIVDKVKECVDHLSREDEEKLVASLWGAERCLRVLESVTVHNQSYLIAYSQLIVSSAKALQHCEELIQQYNRAEDSICLADSKPLQNVTNHVGKAVEDCMRAIIGVLLNL----DNEWGSTKTGE--DGLIGTALNCVL |
6 | 1vt4I3 | 0.22 | 0.16 | 5.11 | 0.91 | HHsearch-2 | | ----EYALHRSIVDHYNIPKTFDSDD---------LIPPYLDQYFYSHI--GHHLKNI----EHP-ERMTLFMVFLDFRFLEQKIRHDS-TAWNASGSILN------------TLQQLK-------FYKPYICDNDPKYERLVNAILD |
7 | 3nxcA2 | 0.11 | 0.09 | 3.40 | 0.62 | Neff-PPAS | | --------------EDSLITRINLILKDEK-DTTARLRLIVLLLLGFGERNPGLTRILTGH-ARLQGRINQLFERIEAQLRQVLREKRMREGGYATDETLLASQILAFCEGMLSRFVRSEFKYRPTD-------DFDARWPLIAAQLQ |
8 | 1vt4I3 | 0.20 | 0.14 | 4.32 | 0.85 | HHsearch | | SIVDHYNIPKTFDSDDL-------------------IPPYLDYFYSHIG---HHLKNI----EHP-ERMTLFMVFLDFRFLEQKIRHDS-TAWNASGSILN------------TLQQ-LK------FYKPYICDNDPKYERLVNAIL- |
9 | 3nxcA2 | 0.09 | 0.08 | 3.05 | 0.61 | SP3 | | ---IEFIEDSLIT---RINLILKDEKD-----TTARLRLIVLLLLGFGERNPGLTRIL-TGHARLQGRINQLFE-RIEAQLRQVLRERMREGGYATDETLLASQILAFCEGMLSRFVRSEFKYRPTDDF-------DARWPLIAAQLQ |
10 | 3nxcA2 | 0.08 | 0.07 | 2.70 | 0.60 | PROSPECTOR2 | | IEF---IEDSLI---TRINLILKDEKD-----TTARLRLIVLLLLGFGERNPGLTRIL-TGHARLQGRINQLFE-RIEAQLRQVLREKRMREGGYAT---DETLLASQILAFCEGMLSRFVRSEFKYR---PTDDFDARWPLIAAQLQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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