Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AITYKEQRDTVTHKLTLANATITDMQTRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAMPTGKSTSAARVDNAASPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCL |
1 | 3na7A1 | 0.07 | 0.06 | 2.58 | 1.05 | FFAS-3D | | ---LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKM------------SEIKSERELRSLNIEEDNQANREIENLQNEIKRKSEKQEDLKKEMLEL-- |
2 | 3na7A1 | 0.09 | 0.08 | 3.04 | 1.03 | Neff-PPAS | | IREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIK-------------SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEK |
3 | 5ynxA | 0.12 | 0.10 | 3.35 | 0.93 | SPARKS-K | | MEEFEEKMDQIEHGLLMLSEQYKELEKTKSK--ELKEQILRELTIAENYLRGALKFMQQEAK--------------------------RTDLNMFERYNFETAVSTIEILVKDLAELAKKVKAVKS |
4 | 2tmaA1 | 0.15 | 0.12 | 4.00 | 1.01 | FFAS-3D | | ---TEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLE----------------------EAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEA-- |
5 | 1vw1A | 0.08 | 0.07 | 2.81 | 0.33 | HHpred | | RQEWEIQRNNAEAELKQIDAQLKSLAVRREAAVLQKTSLKTQQEQTQSQLAFLQRKFSNQLAAIYFQFRCLMANDDAFIKPGAW-QGTYAGLLAGET-LMLSLAQMED------AHLKR------- |
6 | 4rsiB | 0.12 | 0.12 | 4.21 | 0.85 | MUSTER | | LEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVL-NAHRQRAMEARSSLSKAQNKSKVLTALSRLQKS |
7 | 5xg2A | 0.12 | 0.10 | 3.37 | 0.61 | CNFpred | | LELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKAL-----------------------ENPEA-RELTEKIRAVEKEIAALREELSRVEGKLEGL-- |
8 | 3jbhA | 0.12 | 0.10 | 3.34 | 0.48 | HHsearch-2 | | MAKVEDELKALEEKLKKALESLEKEEKVRKEKNDLFLQLESERGDVEERLTKAIGQVQELQERL----------------------------S-REEDAHSNLSSVRKKLDGEISNLKKEIEDLQL |
9 | 1l8dA | 0.11 | 0.09 | 3.17 | 0.98 | Neff-PPAS | | -----------KKLLEELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEELKKA----------KGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIKRL-- |
10 | 6f1tX2 | 0.07 | 0.06 | 2.63 | 0.88 | HHsearch | | KRELEHRNDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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