>PF03142 (525 residues) SGFIHDSVVPQPPSDWMPFGFPLAHTICLVTAYSEGELGLRTTLDSVAMTDYPNSHKVIL VICDGIIKGKGESKSTPEYVLDMMKDHTIPVEDVEAFSYVAVASGSKRHNMAKIYAGFYD YGTQSNIPLDKQQRVPMMVVVKCGTPDEMVKSKPGNRGKRDSQIILMSFLQKVMFDERMT ELEYEMFNGLWKVTGISPDFYEIVLMVDADTKVFPDSLTHMISAMVKDPEIMGLCGETKI ANKRDSWVSAIQVFEYFISHHLAKSFESVFGGVTCLPGCFCMYRIKAPKGAQNYWVPILA NPDVVEHYSENVVDTLHKKNLLLLGEDRYLTTLMLRTFPKRKQVFVPQAVCKTTVPDSFM VLLSQRRRWINSTIHNLMELVLVRDLCGTFCFSMQFVIFIELIGTLVLPAAIAFTFYVVI ISIINQPPQIIPLVLLGLILGLPAILIIITAHSWSYVLWMLIYLLSLPVWNFVLPAYAFW KFDDFSWGDTRKTAGEKTKKAGIEYEGEFDSSKITMKRWAEFERD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SGFIHDSVVPQPPSDWMPFGFPLAHTICLVTAYSEGELGLRTTLDSVAMTDYPNSHKVILVICDGIIKGKGESKSTPEYVLDMMKDHTIPVEDVEAFSYVAVASGSKRHNMAKIYAGFYDYGTQSNIPLDKQQRVPMMVVVKCGTPDEMVKSKPGNRGKRDSQIILMSFLQKVMFDERMTELEYEMFNGLWKVTGISPDFYEIVLMVDADTKVFPDSLTHMISAMVKDPEIMGLCGETKIANKRDSWVSAIQVFEYFISHHLAKSFESVFGGVTCLPGCFCMYRIKAPKGAQNYWVPILANPDVVEHYSENVVDTLHKKNLLLLGEDRYLTTLMLRTFPKRKQVFVPQAVCKTTVPDSFMVLLSQRRRWINSTIHNLMELVLVRDLCGTFCFSMQFVIFIELIGTLVLPAAIAFTFYVVIISIINQPPQIIPLVLLGLILGLPAILIIITAHSWSYVLWMLIYLLSLPVWNFVLPAYAFWKFDDFSWGDTRKTAGEKTKKAGIEYEGEFDSSKITMKRWAEFERD | |||||||||||||||||||
1 | 4hg6A | 0.14 | 0.10 | 3.54 | 1.64 | SPARKS-K | LNGFLSADPTDRPFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGTDQRCMSPDERRRELQQLCRELGV-----------------------VYSTR-------ERNEHA----------------------------KAGNMSAALERL-----------------------------KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP-DPIQRNLCPPENEMFYGKIHRGLDRWGGAF-FCGSAAVLRRRALDEAGGFAGETIT-------------------------EDAETALEIHS--RGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGATFEEVLAYMPGYLAVSFLVQNALFARQRW-PLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVT--------AKDETLSENYISPIYRPLLFTFLLCLS | |||||||||||||
2 | 4hg6A | 0.15 | 0.11 | 3.85 | 2.56 | FFAS-3D | ----------------PLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQ------------------------------------------------------------------------------KAQERRRELQQLCRELGVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLACPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSENYISPIAFPGDRSVLLVVGGWAVLN-- | |||||||||||||
3 | 4hg6A | 0.14 | 0.10 | 3.45 | 4.16 | HHpred | ----SADPTDRPFP-RPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDG------GTDQRCRELQQLCREL----------------------------------------------GVVYS-------------TRERNHAKAGNM------------------------S-----AALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDRNLALDRCPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPL--FRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE--------NYISPIYRPLL-------- | |||||||||||||
4 | 4hg6A | 0.15 | 0.12 | 3.90 | 1.43 | MUSTER | DPTDRPFPRPLQPEE-------LPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPD-PELAQKAQERRR---------ELQQLC---------------------------RELGVVYSTR-------------ERNEH----------------------------AKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGETIT-------------------------EDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVT--------AKDETLSENYISPIYRPLVRWVAFPGD | |||||||||||||
5 | 4p00A | 0.14 | 0.10 | 3.44 | 1.84 | CNFpred | ----------------------LPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS-ERRRELQQLCREL----------------------------------------------GVVYSTRERN------------EHAKAGNMSAALE-----------------------------RLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFIN-PDPIQRNLALG-PENEMFYGKIHRGLDRGGAFFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFRR--GLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFF-VATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETL--------SENYISPIYRPLLFTFLLCLS | |||||||||||||
6 | 4hg6A | 0.14 | 0.10 | 3.57 | 2.11 | HHsearch-2 | NGFLSADPTDRPFP-RPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDG------GTDQRCRELQQLCRE----------------------------------------------LGVVYS-------------TRERNHAKAGNM------------------------S-----AALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDRNLALDRCPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPL--FRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGATFEEVLAYMPGYLA-VSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE--------NYISPIYRPLATLVRGDRS | |||||||||||||
7 | 4hg6A | 0.14 | 0.11 | 3.69 | 1.45 | Neff-PPAS | DPTDRPFPRPLQPEE-------LPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDG-----------------------------------------------------------------------------GTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY-STRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPQRNLALGRCPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAK--------------DETLSENYISPIYRPLLFT | |||||||||||||
8 | 4hg6A | 0.14 | 0.10 | 3.57 | 3.23 | HHsearch | NGFLSADPTDRPFP-RPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDG------GTDQRCRELQQLCRE----------------------------------------------LGVVYS-------------TRERNEHKAGNM------------------------S-----AALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDRNLALDRCPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPL--FRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGATFEEVLAYMPGYL-AVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN--------YISPIYRPLLFTFRGDR- | |||||||||||||
9 | 4hg6A | 0.14 | 0.10 | 3.60 | 1.82 | PROSPECTOR2 | VTLPPPALPTDRPFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELALQQLCREL----------------------------------------------GVVYST------------RERNEHAKAGNMSAALER-----------------------------LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP--DPIQRNLALENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGE-------------------------TITEDAETALEIH--SRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSENYISPLPGVGDPHPALEAGGWRTMREF | |||||||||||||
10 | 4hg6A | 0.14 | 0.10 | 3.43 | 3.76 | SAM | --FLSADPTDRPFP-RPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDG------GTDQRCRELQQLCRE----------------------------------------------LGVVYSTRER------------NEHAKAGNM------------------------S-----AALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDRNLALDRCPPENEMFYGKIHRGLDRWGGAF-FCGSAAVLRRRALDEAGGF----------------------------TITEDAETALEIHSR--GWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLS---------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |