Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | YDIIKNLAIALTCLVCSIKTVAIWLKFTNIRNMFDIIKRQDQRISLAEDESYYYKNITFKNVRLVLYTFVILCIGSSSFAELMVLWNGLMGSWELMYPGYFPFDTFSSAKLYLVAHVYQYVGVSFQILQNVLNDTFAAMHLALLSGQIHALSMRVAKLGRDVKKSQTENNQELLKCIQDHKDILIYRSKLQEVISFYMFLQILFTSINLCATIVFVILFATDFFTMLYYFFYFLAMTGEILPVCYYGTIMEEEFQNLTYALFSSNWMDQDAVFKKHLRIFAETTKKPFNTKAMK |
1 | 6c70A | 0.16 | 0.16 | 5.40 | 2.14 | SPARKS-K | | DDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPN-SHPLFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITF-IEDSPIPRLMIRTFYPFNA-MSGAGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELTKKQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
2 | 6c70A | 0.17 | 0.17 | 5.49 | 3.55 | FFAS-3D | | -DLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGIT--FIEDSPIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELTKKQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
3 | 6c70A | 0.16 | 0.16 | 5.31 | 4.53 | HHpred | | DDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESNARF-HALAITKMRRLLFCVAGATIFSVISWTGITFIEDS-PIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
4 | 6c70A | 0.16 | 0.16 | 5.40 | 1.97 | MUSTER | | DDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSH-PLFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFI-EDSPIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELTKKQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
5 | 3rkoB | 0.09 | 0.09 | 3.26 | 1.16 | CNFpred | | FAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILLMWATLMLLGGAVGKSAQ----LPLQTWLADAM--AGPTPVSALIHAATMVTAGVYLIARTHGLFVLHLVGIVGAVTLLLAGFAALV------QTDIKRVLAYSTMSQIGYMFLALGAWDAAIFHLMTHAFFKALLFLASGSVILACEQNIFKMGGLRIPLVYLCFLVGGAALSATAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHG |
6 | 6c70A | 0.16 | 0.16 | 5.31 | 5.85 | HHsearch-2 | | DDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESNARF-HALAITKMRRLLFCVAGATIFSVISWTGITFIED-SPIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
7 | 6c70A | 0.17 | 0.17 | 5.49 | 2.89 | Neff-PPAS | | DDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFIED--SPIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMGLTKKQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
8 | 6c70A | 0.16 | 0.16 | 5.21 | 8.29 | HHsearch | | DDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESNARF-HALAITKMRRLLFCVAGATIFSVISWTGITFIEDS-PIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGA- |
9 | 6c70A | 0.16 | 0.16 | 5.21 | 2.42 | PROSPECTOR2 | | FDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPN-SHPLFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFIED-SPIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATGEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
10 | 6c70A | 0.16 | 0.16 | 5.30 | 3.33 | SAM | | -DLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESNARF-HALAITKMRRLLFCVAGATIFSVISWTGITFIEDS-PIPRLMIRTFYPFNAMSG-AGHVFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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