Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LTEFFSRRLKYDARPIDEHPLSIVSPVDGVVSQVGKIRHGTIIQAKGIDYSVSSLLGESPGETGFEDGYYMTIYLSPKDYHRIHMPLEGKVTRSTYIPGRLFPVNEIGVTQVKGLFTKNERVITHIQTEAGEMAMVKVGAFIVGSVQVAYKESFKRKKRTVHKNTMHTKPYFKKGSEIGHFEFGSTVILLFQKERVMINQTIQPGAAVKMGEKIGE |
1 | 1gprA | 0.12 | 0.08 | 2.78 | 1.13 | SPARKS-K | | -----------EPLQNEIGEEVFVSPITGEIHPITDVPD-------------QVFSGKMMGD---------GFAILPSE-GIVVSPVRGKILNVFPTK-----------------------HAIGLQSDGGREILIHFGI------------DTVSLKGEGFTSFVSEGDRVEPGQKLLEVVPSLMTPIVFTNLAETVSIKVNREQE-----DIVK |
2 | 3ourB | 0.15 | 0.09 | 2.97 | 1.17 | CNFpred | | --------------------IEIIAPLSGEIVNIEDVP-------------DVVFAEK-------IVGDGIAIKPTG---NKMVAPVNGTIGKIFE-----------------------TNHAFSIESDDGVELFVHFGIDTV-GFTRIA----------------EEGQTVKAGDTVIEFD-STLTPVVISNMIKELNKL---SGSVVVGETPVL |
3 | 1gprA | 0.12 | 0.08 | 2.79 | 1.48 | HHsearch-2 | | -----------EPLQNEIGEEVFVSPITGEIHPITDVPDQV-------------------FSG---KMMGDGFAILPSE-GIVVSPVRGKILNVF-----------------------PTKHAIGLQSDGGREILIHFGIDTVEGFTSFVS----------------EGDRVEPGQKLLEVDLDSLTPIVFTNLAEGETVSIKASGSVNREQEDVK |
4 | 1gprA | 0.12 | 0.08 | 2.78 | 1.02 | Neff-PPAS | | ------------PLQNEIGEEVFVSPITGEIHPITDVP---------DQVFSGKMMGD-------------GFAILPSE-GIVVSPVRGKILNVF-----------------------PTKHAIGLQSDGGREILIHFGIDTVSGFTSFVS----------------EGDRVEPGQKLLEVDLSLMTPIVFTNLAEGETVSIKASGSVNREQEDIV |
5 | 1gprA | 0.12 | 0.08 | 2.78 | 1.73 | HHsearch | | -----------EPLQNEIGEEVFVSPITGEIHPITDVPDQV--------------F-----S---GKMMGDGFAILPSE-GIVVSPVRGKILNVF-----------------------PTKHAIGLQSDGGREILIHFGIDTVEGFTSFVS----------------EGDRVEPGQKLLEVDLDSLTPIVFTNLAEGETVSIKASGSVNREQEDI- |
6 | 4jbwM | 0.14 | 0.08 | 2.85 | 1.16 | CNFpred | | --------------------IEIIAPLSGEIVNIEDV-------------PDVVFAEK-------IVGDGIAIKPTG---NKMVAPVDGTIGKIFE-----------------------TNHAFSIESDSGVELFVHFGIDTV-GFKRIA----------------EEGQRVKVGDTVIEFD-STLTPVVISNMIKELIKL---SGSVTVGETPVI |
7 | 1ax3A | 0.12 | 0.08 | 2.93 | 1.43 | HHsearch-2 | | --------MIAEPLQNEIGEEVFVSPITGEIHPITDVPDQV--------------F-----SG---KMMGDGFAILPSE-GIVVSPVRGKILNVF-----------------------PTKHAIGLQSDGGREILIHFGIDTVEGFTSFVS----------------EGDRVEPGQKLLEVDLDSMTPIVFTNLAEGETVSIKASGSVNREQEIVK |
8 | 1ax3A | 0.12 | 0.08 | 2.92 | 1.66 | HHsearch | | --------MIAEPLQNEIGEEVFVSPITGEIHPITDVPDQV--------------F-----S---GKMMGDGFAILPSE-GIVVSPVRGKILNVF-----------------------PTKHAIGLQSDGGREILIHFGIDTVEGFTSFVS----------------EGDRVEPGQKLLEVDLDSMTPIVFTNLAEGETVSIKASGSVNREQEIV- |
9 | 2gprA | 0.16 | 0.09 | 3.09 | 1.11 | CNFpred | | --------------------LKVLAPCDGTIITLDEV-------------EDEVFKER-------MLGDGFAINPKS---NDFHAPVSGKLVTAF-----------------------PTKHAFGIQTKSGVEILLHIGLDTV-GFESFV----------------TQDQEVNAGDKLVTVDLIKSPIIFTNNGGKT-MGEVKQGDVVAILK---- |
10 | 3ei4A | 0.06 | 0.04 | 1.84 | 1.11 | CNFpred | | --------------------SQVVVAVGRALYYLQIHP--QELRQIS-HTEM--------------EHEVACLDITPSPLCAIGLWTDISARILKLP--SFELLHKEMLGGE-----IIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDR--KKVTLGTQPTVLRTFRTTNVFACSDRPTVIYSSNKLVFSN---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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