Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LIDTLHLKTSPVAVRLVKADEELPADVQRITENVRHCQMVDNVRRKGSQFYALLEDHMCKGGAAVMGLTEMGEKLKTGEVYYHLNHFGSMDAAKSTMEKVPRVPAHSVKAVVYSPLEKTTFNPDVILIITNPKQVMELSQALLHKSGGRVNASFAGKQSVCADGVAYPYLSGEAGVTVGCSGSRKYTEIKDDEMIISIPVDMLPGLV |
1 | 2pffB | 0.13 | 0.12 | 4.22 | 1.02 | HHsearch-2 | | HGSLEHVLLVPTASQLQEQFNKLPEGFAADDEPTTPAELVGKFLGYSSLVEPSKVQFDQVLNLCLTEFENCYLDLAAKLLENDTTLVKTKELIKNYITARIPFD-KKSNSALF--RAVGEGNAQLVAIFTDDEELRDLYQTYHVLVGDLIKF--SA--ETLSELI-RTTLDAEQGLNILEWLENP-SNTPDKDYLLSIPISCPLIGV |
2 | 1yxyA | 0.12 | 0.10 | 3.61 | 1.05 | SP3 | | LMEQLK-GGIIVSCQALPGEPLYSETGGIMP------LMAKAAQEAGVGIRANSVRDI-KEIQAITD-LPIIGIIKKDYPPQEPFITATMTEVDQLAATKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGTTLSGYTPYSRQEAGPD--VALIEALCKAGIAVIAEG--------KIHS--------PEEAKKIN |
3 | 6eqoA | 0.12 | 0.10 | 3.57 | 0.72 | SPARKS-K | | IASALRVDA-VVVVKHTQPDLPWNEARDHWSHDLAGEELLKAARDAGFDV-------------------ADEEALLALSD---------TEFVRAIWAGAPVLDAEYPNFIIYTSGSTG--KPKGVVHVH-GGYASGVAATMPAAFGAEPGDVMYGWITGQSYQIAASLLSRVTTVITFPHAGRERYGVN----VFKAGVTFLKSVM |
4 | 3h1tA2 | 0.11 | 0.09 | 3.15 | 0.52 | FFAS-3D | | ---------APYRVHRVISEVDATKDFERVIALKARTDAFAKHLTDAKTIVFCVDQEHADERRAL--NNLNSDLSRKHPDYVARVTSEEGKIGKGHLSRFQELETSTPVILTTSQLLTTGVDPTCNVVLARVVNSSEFKQIVGREDYGKLWFNIIDYTGSATQNFADPDFDGYPEIE------------------------------ |
5 | 2livA2 | 0.05 | 0.03 | 1.38 | 0.26 | HHpred | | ------------------------------------PTAAKYILEVKQRIAIVHDKQ-----------------------------QYGEGLARAVQDGLKKGN-ANVVFFDGITAGEKKENIDFVYYGGYHPEMGQILRQARAAGLK-TQF-MGP-EGVANVSLSNISAEGLLVTKPKEF--GVFDWHANGTAT------------ |
6 | 2l82A | 0.15 | 0.11 | 3.72 | 0.69 | MUSTER | | ---------MSQIFVVFSSDPEI------------LKEIVREIKRQGVRVVLLYSDQDEKRRR-----ERLEEFEKQGVDVRT---VEDKEDFRENIREI---------------WERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNKD---DDRRKEAQQEFRS------DGVDVRTVSDKEEL-----IEQVRRFV |
7 | 3t95A | 0.07 | 0.06 | 2.39 | 0.88 | CNFpred | | INNFVNQ--GYNAIVVSAVSP------------DGLCPALKRAMQRGVKILTWDSDTKPECRSVYINQG------------------TPNQLGSMLVDMAAQVKKEQAKVAFFYSSPTVT-GWEIVTTQFGATKSLQTAEGILKAY--DLDAIIAPD-ANALPAAAQAAEN-NVAIVGFSTPNVMRPYVERVKEFGLWDVVNQGKIS |
8 | 6hxiB | 0.13 | 0.12 | 4.03 | 0.48 | HHsearch-2 | | ALKEKKITKPLVAWVTGTCSPYLPASVQFGAGAKANTAQAKNDRQAGAYVPRSFDDYGEMVRQVYDML--L----TRGIVQKEPEPRIPTDYSKALATGDIRKPTGELLY-AGKKSDVLDRKMGGVIGLLWFEYAAHFIELIVADHGP--A------VSGAHNAI-VASCAGKDLISSGGAIAREFKRQETG-L---APEQFVGEMK |
9 | 2x4dA | 0.12 | 0.11 | 3.75 | 0.64 | Neff-PPAS | | MAPWGKRLAGVRGVLLYDSGAGGGTAIA------GSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLG-----FDISEQEVTAPAPAACQILKERGL-----RPYLLIHDGVRSETSNPNCVVIADFSYQNMNNAFQVLMELEKPVLISLGKGRYYAA--------TSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSA |
10 | 4m88A2 | 0.17 | 0.06 | 2.06 | 0.34 | HHsearch | | -----------------------------------------------SKLATLYQDLP-TGTSGA-VV-------------------------QEAVKTVP-GG-KIELNGVKSGPDQIALGAQGVLVIGPPPFIVAGIAALRKADVTQ-PLF------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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