Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LNQTVFIGRVSTGPSLLLMIPVGVFIAVPVGELAGRIGAGGYSGAVVAFIIVGQASALVSALMMAGVAGSAICTDLGSRKIREEVDAMEVMGLNVIERLVAPRLLAAIIVSLVLCSLITVTGVGACYLYHIYVQHLPAGAFMATFSQYGRFSDFVMALVKAATFALLSTIVACFKGLHARGGPRGVADAVNEAVTFG |
1 | 5edlA | 0.13 | 0.11 | 3.90 | 1.07 | SPARKS-K | | -----SWKVKEIVIMSVISIVFAVVYLLFTHFGNVLAGMFGPIAYEPIYGIWFIVSVIAAYMIAALVSEIIAALVECLLGNPS--------GPMVIVIGIVQGLGAEAVFLAPVLMLAGMGSSVASFIYDLFVSG----------YAAYSPGYLLIMLVIRLISGALLAGLLGKAVSDAYTGGMALGKELKKKRKRA |
2 | 6ic4G | 0.26 | 0.26 | 7.99 | 2.66 | FFAS-3D | | VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFHDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMTRTVVYS |
3 | 6ic4G | 0.26 | 0.26 | 7.99 | 1.57 | MUSTER | | VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMTRTVVYS |
4 | 5gpjA | 0.09 | 0.08 | 3.09 | 1.08 | CNFpred | | VGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADL-------------DPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVA------SISSFGLNHELTAMLYPLIVSS-VGILVCLLTTLFATDFFEIVKEIEPALKKQLVIS |
5 | 6ic4G | 0.26 | 0.26 | 7.99 | 6.21 | HHsearch-2 | | VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMTRTVVYS |
6 | 6ic4G | 0.26 | 0.26 | 7.99 | 2.21 | Neff-PPAS | | VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFHDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMTRTVVYS |
7 | 6ic4G | 0.26 | 0.26 | 7.98 | 8.54 | HHsearch | | VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMTRTVVY- |
8 | 5cwmA | 0.11 | 0.11 | 3.86 | 0.93 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQALEKALRTAEEAARE-AKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVL--ELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAAVELVKRVAELLERIARESGSEEAKERAERVLRER |
9 | 6ic4G | 0.26 | 0.26 | 7.98 | 2.71 | SAM | | -YQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMTRTVVYS |
10 | 5y50A2 | 0.11 | 0.11 | 3.86 | 1.06 | SPARKS-K | | SLFEGMGEFFRFGIPSASMICLEWWSFEFLVLLSGILPNPKLEASVLSVCLSTQSSLYQIPESLGAAASTRVANELGAGNPKQARMAVYTAMVITGVESIMVGAIVFGARNVFGYLFVVDYVKSMAPLLSLSVIFDALHAALSGVARGSGRIGAYVNLAAYYLFGIPTAILLAF---GFKMRGRGLWIGITVGSCVQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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