>PF02101 (398 residues) MASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGALRLALGLLQLLPRRRPAGPGNP ATSPPASVRILRAVTACDLLGCLGIVIRSTVWLGFPNFVDSISDVNSTDIWPTAFCVGSA MWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILLYHIMAWGLATLLCMEGAAMLYYPS VSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAVASLLKGRQGIYTENERRMGA MIKIRFFKIMLVLMICWLSNIINESLLFYLEMQTDINGGSLKPVRTAAKTTWFIMGILNP VQGFLLSLAFYGWTGCSLGFQSPRKEIQWESLTTSAAEGAYPSSVDSRVPHENPASRKVS HVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNDGD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGALRLALGLLQLLPRRRPAGPGNPATSPPASVRILRAVTACDLLGCLGIVIRSTVWLGFPNFVDSISDVNSTDIWPTAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILLYHIMAWGLATLLCMEGAAMLYYPSVSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAVASLLKGRQGIYTENERRMGAMIKIRFFKIMLVLMICWLSNIINESLLFYLEMQTDINGGSLKPVRTAAKTTWFIMGILNPVQGFLLSLAFYGWTGCSLGFQSPRKEIQWESLTTSAAEGAYPSSVDSRVPHENPASRKVSHVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNDGD | |||||||||||||||||||
1 | 2ks9A | 0.11 | 0.09 | 3.36 | 2.04 | SPARKS-K | VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMR------TVTNYFLVNLAFAEASMAAFNTVVNFTYAVHN-----------EWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLSATATKVVICVIWVLALLLAFPQGTTETMPSRVVCMIEIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYIN-PDLYLKKFI--------QQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGA--------------------------------- | |||||||||||||
2 | 4k5yA2 | 0.13 | 0.08 | 2.79 | 2.95 | FFAS-3D | ------------------------HYHVAAIINYLGHCISLVALLVAFVLFL------RARSIRCLRNIIHANLIAAFILRNATWFVVQLTM------------SPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLWDARLRAWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWAGKRPGVYTDYIYQGPMALVLLINFIFLFNIVRILMT----KLRASTTSETIQARKAVKATLVLLPLLGITYMLAFV---------------------NEVSRVVFIYFNAFLESFQGFFVSVFACFLNS----------------------------------------------------------------------------------- | |||||||||||||
3 | 5xszA | 0.12 | 0.08 | 2.95 | 3.99 | HHpred | ---------------------DNFKYPLYSMVFSIVFMVGLITNVAAMYIFMCSLKL------RNETTTYMMNLVVSDLLFV-LTLPLRVFYFVQQN-----------WPFGSLLCKLSVSLFYTNMYGSILFLTCISVDRFLAIVYPFTKRNAKIVCAAVWVLVLSGSLPTGFMLNSNNSISCFEWKSVIFIETVGFLIPLMLNVVCSAMVLQTLRRPNTVNIFEMRNTGTWDAYLNKKKILRMIIVHLFIFCFCFIPYNVNLVFYSLVRTNTLAAESVVRTIYPIALCIAVSNCCFDPIYYFTSE----TIQNSASSEDLYFQ------------------------------------------------------------------------- | |||||||||||||
4 | 4l6rA2 | 0.16 | 0.11 | 3.77 | 1.75 | MUSTER | ----------------EVQKEVAKMYSSFQVMYTVGYSLSLGALLLALAILGGLSKLHCT------RNAIHANLFASFVLKASSVLVIDGLLR-------------TLSDGAVAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLATERSFFSLYLGIGWGAPMLFVVPWAVVKCLFENVQCWTSNDN-MGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHT----DYKFRLAKSTLTLIPLLGVHEVVFAF-----------VTDEHAQ----GTLRSAKLFFDLFLSSFQGLLVAVLYCFL-NKEVQSELRRRWHRWRLGKVLWEERN---------------------------------------------------------- | |||||||||||||
5 | 4buoA | 0.12 | 0.08 | 2.92 | 1.65 | CNFpred | -----------------------YSKVLVTAIYLALFVVGTVGNSVTLFTLARKK------SLQSTVDYYLGSLALSDLLILLLAMPVELYNFIW---------VHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPF-RSRTKKFISAIWLASALLAIPMLFTMGLQNGLVCTPIVTLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ------PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYIS-----DEQWTTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQV------------------------------------------------------------------------------ | |||||||||||||
6 | 5zbhA | 0.09 | 0.07 | 2.48 | 0.82 | HHsearch-2 | ----------------DDCHLPLAMIFTLALAYGAVIILGVSGNLALIIIILKQKE-M-----RNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDH-----------WVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRNNRHAYVGIAVIWVLAVASSLPFLIYQVMKDKYVCFDQFYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNIFEMLRIDAYDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIA--T-------CNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDL-QFFFNFCD-------------------------------------------------------------------- | |||||||||||||
7 | 4l6rA2 | 0.14 | 0.10 | 3.36 | 2.25 | Neff-PPAS | --------------VQKEVAKMYSSFQVMYTVGYSLSLGALLLALAILGGLSKLHC---------TRNAIHANLFASFVLKASSVLVIDGLLR-------------TLSDGAVAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLLPERSFFSLYLGIGWGAPMLFVVPWAVVKCLFENVQCWT-SNDNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHT----DYKFRLAKSTLTLIPLLGVHEVVFAF---------------VTDEHAQGTLRSAKLFFDLFLSSFQGLLVAVLYCFLNKEVQSELRRRWHRWRLGKVLWEERN----------------------------------------------------------- | |||||||||||||
8 | 5zbhA | 0.09 | 0.07 | 2.48 | 1.31 | HHsearch | ----------------DDCHLPLAMIFTLALAYGAVIILGVSGNLALIIIILKQK-EM-----RNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDH-----------WVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRNNRHAYVGIAVIWVLAVASSLPFLIYQVMKDKYVCFDQFYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNIFEMLRIDAYDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIA--T-------CNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFN-FCD-------------------------------------------------------------------- | |||||||||||||
9 | 2ks9A | 0.11 | 0.09 | 3.37 | 2.42 | PROSPECTOR2 | VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMR------TVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNE-----------WYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWAEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFI---------QQVYLAIMWLAMSSTMYNPIIYCCLN---DRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTI--------------------------STVVGA | |||||||||||||
10 | 4rnbA | 0.14 | 0.09 | 3.11 | 3.19 | SAM | ----------------------KEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMR------TVTNYFIVNLSLADVLVTITCLPATLVVDITET-----------WFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPSTAKRARNSIVIIWIVSCIIMIPQAIVMECSLFTVCDERMYHICFFLVTYMAPLCLMVLA----YLQIFRKLWCRQGI------SKQIRARRKTARMLMVVLLVFAICYLPISILNVLKRVFGMFAH-DRETVYAWFTFSHWLVYANSAANP-------IIYNFLSGKFREEFKA--------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |