Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | KSAVFGGLDGIITTFATVTSVAGSGLPHAVILILGLAHLVADGLSMGMGDYLSTQAETDLIKHERSRELWEMENFPEGEKAEMIELYEAKGISSEDAKLVVDTLSKYKEAFVDIMMVEELKLMPVDDDENPFIGGLVTFGSFVLFGAVPLLSYLINLLPGISLTGEQALWGSCFLTVLTLFMLGAVKGQYVGQKWYLSGAYMAINGTVAAGMGWVIG |
1 | 6iu3A | 0.29 | 0.28 | 8.56 | 3.07 | SPARKS-K | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPDP-KRALQSAFTIAIAYVLGGLVPLIPYMFIP------VARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
2 | 6iu3A | 0.29 | 0.28 | 8.56 | 3.08 | FFAS-3D | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGL-EKPDPKRALQSAFTIAIAYVLGGLVPLIPYMF------IPVARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
3 | 6iu3A | 0.29 | 0.28 | 8.56 | 5.97 | HHpred | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPDP-KRALQSAFTIAIAYVLGGLVPLIPYMFIPV------ARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
4 | 6iu3A | 0.29 | 0.28 | 8.56 | 2.85 | MUSTER | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPDP-KRALQSAFTIAIAYVLGGLVPLIPYMFIP------VARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
5 | 4p19A | 0.12 | 0.11 | 3.88 | 0.87 | CNFpred | | --------YAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLPISFIKHAKDAMLTAFVTSSSGTLPVTMRVAKEMGISEGIYSFTLPLGAT-YQGVATFFIANALGSHLTVQQLTIVLTAVLASIGTVPGAGAIMLCMVLHSVGLP---TDPNVAAAYAMILGIDAILDMGR----------TMVNVTGDLTGTAIVAKTEG |
6 | 6iu3A | 0.29 | 0.28 | 8.56 | 4.78 | HHsearch-2 | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPDP-KRALQSAFTIAIAYVLGGLVPLIPYMFIPV------ARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
7 | 6iu3A | 0.29 | 0.28 | 8.56 | 3.38 | Neff-PPAS | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPD-PKRALQSAFTIAIAYVLGGLVPLIPYMFIP------VARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
8 | 6iu3A | 0.29 | 0.28 | 8.55 | 7.48 | HHsearch | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPDP-KRALQSAFTIAIAYVLGGLVPLIPYMFIPV------ARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGM- |
9 | 2yfaA | 0.07 | 0.06 | 2.66 | 0.84 | PROSPECTOR2 | | DTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQ----AMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSS---ANEQAALRQLDAALADTDNLKRQ----------LPSEDARLQQFENAVLAYAVRQFRDAVANITTSRAEMTVQIVKRSDALYQIQLE |
10 | 6iu3A | 0.29 | 0.28 | 8.56 | 2.43 | SAM | | RDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMMKFELGLEKPDP-KRALQSAFTIAIAYVLGGLVPLIPYMFIPV------ARKAVVASVILTLMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|