Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | LYLLGSFHVLKPSDYPLSPDVMQAFAKADRLVFELPPSDAQSPELAGRMLQAARRSDGRRLQDALDPKTWQALTTYARKHGMPVDSLQTLEPWFVALTISLAEMSRQGMDPNAGLDQYLMAQAQAGGKPADGLERAEEQIALLDGMSPTEQHQLLEESLDDAGANDQLRQLHAAWRSGDVRTLSTQMAEEMRQHYPALYQDINVERNARWVPRLEQRLGKGSGTTLVVVGALHLLGSDGVVERLRARGYHVER |
1 | 5cwcA | 0.13 | 0.09 | 3.27 | 0.70 | SPARKS-K | | -----------------------------------SEKEELRERLVKICVENAKRKGDDTEAREAAREAFELVREAAERAGIDSS--EVLELAIRLIKECVENAQREGYDAAAEAFKRVAEAAKRAGI------TSSEVLELAIRLIKECVENAQREDISEAAAAEAFKRVAEAAKRAGISETLKRAIEEIRKRVEEAQREI-SEACRQAAEEFRKKAEELKRR----------------------------- |
2 | 4b0zA | 0.09 | 0.08 | 2.83 | 0.92 | FFAS-3D | | ---------------------------------PLGSMSTLDLNHLADLYD------RKDWNAC--KKELLKLKVELAKQNLFVPTSDKEKASFARNVFEYGVLVSIQTCDIESFARYASQVIPFYHDSLVPSSRMGLLLYLLSENRIAEFHTALESLFERDPYVEWVISLEQNVMEGAFDKVASMIRSCNFPEFSYFMKIVMSMVRNEIATCAEKVYSE--------IPLSNATNTKETEKLAEERGWDIRD |
3 | 2g5gX | 0.09 | 0.07 | 2.74 | 0.43 | HHpred | | --DFYILDTHTQKKISFED--ILELLKADVILLGEKHDEVKHKISQV-IFNALEGQNINDVLEL-ASTEQNHLDKAFKNKTIKANELTNALNW-----------D-KVWK--WKDYEQFVNVVFYSKSKILGANLSRSEITSIYNGAQP--------LKGYVSTKKQLFDIISLSHKLNKELLDKLVEI------------Q-QFKDRR-ADVLVHH--VN--KVLLLAGSYHTSKKIGIPLHIQDFKSSIV- |
4 | 5cwmA | 0.16 | 0.13 | 4.49 | 0.77 | MUSTER | | ------------DPEDELKRVEKLVKEAEELLRQA--KEKGSEEDLEKALRT--------AEEA--AREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELGDPEVALRAVE---VVRVAELLLRIAKESGSEEALERALRVAEE--AARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAK-------ERAERVREEARELQERVKE |
5 | 6enoA | 0.12 | 0.10 | 3.50 | 0.64 | CNFpred | | KKVFATFCVY------VPEEIINAT-GSACIGLCGG-----AQYTVPAGETV--------LPRNLCPLIKSAMGFKI----------ERICPYFQVAYVVGETT--------CDGKKKAWEILNE-YIPVYVME-EERDRKFWEE-EIKDFAQFVEEKTGVKLNAENLRAGIEKINKKALKRLSDLRKHNPAPIHGLDVLLINQLAPERFATKVNELCDE-DAPRILITGTPQPIPHWKIHALIEGAGGVVVG |
6 | 1vt4I3 | 0.14 | 0.08 | 2.70 | 0.64 | HHsearch-2 | | ------------------------------------------------------------------------------EYALH--------RSIVDHYNIPKTFDSDDLI-PPYLDQYFYSHIGH---HLKNIEHPERMT-LF-RMVFLDFRFLEQKIRHDSTAGSILNT---------LQQL-KFYKPYICDNDPKYERLVN-----AILDFLPKIEENL--ICSKYTDLLRIALMAEDEAIFEEAHKQVQR |
7 | 5cwmA | 0.15 | 0.12 | 4.13 | 0.74 | Neff-PPAS | | ------------------------------------DELKRVEKLVKEAEELLRQAKEKGSEEDLEAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEE--AARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGS-------EEAKERAERVREEARELQERVKE |
8 | 2g5gX | 0.10 | 0.08 | 2.95 | 0.62 | HHsearch | | NKDFYILDTHTQKKISFED--ILELLKADVILLGEKHDEVKHKISQV-IFNAL-EGNIFDVLEL-ASTEQNHLDKAFKNKTIKANELTNALNW-----------DK-VWK--WKDYEQFVNVVFYSKSKILGANLSRSEITSIYNGAQP--------LKGYVSTKKQLFDIISLSHKLNKELL------------DKLVE-IQQFKDRR-ADVLVHH--VN--KVLLLAGSYHTSKKIGIPLHIQDFKSSIV- |
9 | 3p96A | 0.16 | 0.14 | 4.75 | 0.76 | SP3 | | ----------PKVSVGVTATLFEVLSRHGGVLVCCPADVADGPALRHDVEAAIDVPIIRELGRPITAAAFGAVAREVAALGVNIRGVSDYPVIGLELRVSVPPGADEA------LRTALNRVSSEEHVDVAVEDYTLERRAKVDS--TLVQGEVIEMLAAKAGAEGQVAAITDAAMRGDFAQSLQQRVATLAGLPATVIDEVAGQ-----ARTTLRTLRRLGYACGVVSGAEEL-MVDGLREFAQRAGVPMAQ |
10 | 2qenA | 0.09 | 0.08 | 3.21 | 0.82 | PROSPECTOR2 | | MLFDLRPKTRREDIFDREEKLEESLENYPLTLLYAERGHITREELIKELQSTISPFQTLEPRKLSLREVFRELNDLGEELGEYLRFYGSRGGKELLALFAYAYDSLPNLSE-----VGLLHDFLKITDYESPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVNPENEIEEAVEYLRNGDFGRAMKRTLEVAKGLIMGELEEL--RRRSPRYVDILRAIALGYNRWSLIRDYLAVKGTKILLENLKKMNWVEED |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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