Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | RFVLDTHLGKLASYLRMLGFDTLYQNDYTDDTLAHISAQEHRLLLTRDRGLLKRRQVTHGYYVRNTDPNAQVVEVLQRFDLFSSIKPFQRCLHCNKTLRPVEKQVIEDRLPPKVREHYDRFHTCDDCRRIYWEGTHYEKMNEF |
1 | 3gn5A1 | 0.11 | 0.04 | 1.52 | 1.03 | HHsearch-2 | | ---------------------------------------------------------------------------------------HMKCPVCHGEMVSGIKD-IPYTFRGRKTVKGIHGLYCVHCEESIMNKEESDAFMAQ |
2 | 3gn5A1 | 0.11 | 0.04 | 1.51 | 1.50 | HHsearch | | ---------------------------------------------------------------------------------------HMKCPVCHGEMVSGIKD-IPYTFRGRKTVKGIHGLYCVHCEESIMNKEESDAFMA- |
3 | 6ifhA | 0.12 | 0.08 | 2.97 | 0.87 | SPARKS-K | | LLIVDDIRLLLNEVFKREGYTTFLAA--NGIEALDIAERVKPVLLDMKKRIKTRTPDVPVLMMTAYGELDLIKEAMDL-GAS-------------HYFTPFDIYELRDAVNEMLRD--------------------------- |
4 | 4r3uC | 0.17 | 0.13 | 4.16 | 0.52 | FFAS-3D | | RVLLDRGVKVVARALRDAGMDVIYSGHRTPEEVVNTAIQEDVDVL--------------GVSLLSGVQLTVFPKIFKLLDERGAGDL-------IVIAGGVMPDEDAAAIRK------------LGVREVLLQDTPPQAIID- |
5 | 1rxwA | 0.13 | 0.13 | 4.37 | 0.36 | HHpred | | --VDEYIVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGVEYTGSQDYDSLLFGS-PRLARNLAKPEIIILESNLKRLGLTRE-QLIDIAILVGTDYNGVGVKKALNYIKFRALKALKVVELNPDDYRIEFREPDFEKAIEF |
6 | 1lssA | 0.20 | 0.16 | 5.15 | 0.82 | MUSTER | | YIIA---IGTLAKSLSEKGHDVLI--DIDKDICKKASAEIDALVINTKIKTLEDAGIADMYIAVTGKVNLMSSLLAKSYGINKTIARIS---------EIEYKDVFERLGVDVVVSPELI-------------ANYIEKLIER |
7 | 6c34A | 0.19 | 0.10 | 3.17 | 0.75 | CNFpred | | -------VNMILELLDAFGIPTAGAAGEANDVLGTLSAREPVVVVSGDRDLLQLVRDPQVRVLYLGATKWGPAEVAEQYGVP------------------------------------------------------------- |
8 | 2hu9A | 0.15 | 0.06 | 1.89 | 0.44 | HHsearch-2 | | ---------------------------------------------------------------------------------------MMRCPECSTEGWRVLPLTVGAHVKEGLWSKKGDFYFCSSCEVVYFNEQ--TVFRKG |
9 | 1l6rA | 0.06 | 0.06 | 2.48 | 0.70 | Neff-PPAS | | DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGGPVFGENGGIMFDNDGS----IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK |
10 | 2k5cA | 0.19 | 0.07 | 2.25 | 0.66 | HHsearch | | ---------------------------------------------------------------------------------------MAKCPICGSPLKWE--ELIEEMLIERFLAQVEEFFKCPVCGEEFYGKT-LPEAEK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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