Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | QYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFGEWILKFFGISLDAFKIAGGILLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATPLLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYLTLLSAESVLDRIGRLGIRILTRMMGLILTAIAVQMIVNGIRGAL |
1 | 4ikvA2 | 0.11 | 0.10 | 3.74 | 1.26 | FFAS-3D | | ---VETFISLVGILGIIIPIIYFVVMYPKTTAEERSRVIAYIPLFVASAMAIQEQGSTILANYIHLSPAWFQSLNPLFIIILAFAWMW----------VKLGKRQPTIPQKFALGL-LFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFS--AQTMSLWFLSNAAAQAINALVRFY |
2 | 5vkvA | 0.17 | 0.16 | 5.38 | 1.45 | HHpred | | SLTAAFLAGVLSFLSPLPLVPTYLFYLGGA----RGRPLFNALFFILGFGAVFFLLGLPFTGLLFEHRQTLARVGGVVLVLFGLYMLGLRP-RWGVSLRYELGAFLLGATLALGWTPC-IGP-ILGAILTLTAVGGGV----GFLLAYILGAVPFFVVALFADRIKGWLRRRISHYVEVLAGVVLVLVGVLLFTGTFTALN |
3 | 5vkvA | 0.16 | 0.16 | 5.26 | 1.49 | MUSTER | | SLTAAFLAGVLSFLSPLPLVPTYLFYLGGA----RGRPLFNALFFILGFGAVFFLLGLPFTLLGGEHRQTLARVGGVVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGATLALGWTPCI--GPILGAILTLTAVGGGVGFLLAYILGLAVPFFVVALFADRIKGWLRRAG-RISHYVEVLAGVVLVLVGVLLFTGTFTALN |
4 | 5vkvA | 0.17 | 0.16 | 5.38 | 2.98 | HHsearch-2 | | SLTAAFLAGVLSFLSPLPLVPTYLFYLGGA----RGRPLFNALFFILGFGAVFFLLGLPFTGLLFEHRQTLARVGGVVLVLFGLYMLGLRP-RWGVSLRYEGGAFLLGATLALGWTPC-IGP-ILGAILTLTAVGGGV----GFLLAYILGAVPFFVVALFADRIKGWLRRRISHYVEVLAGVVLVLVGVLLFTGTFTALN |
5 | 5vkvA | 0.15 | 0.14 | 4.87 | 1.25 | Neff-PPAS | | -LTAAFLAGVLSFLSPLPLVPTYLFYLGGA----RGRPLFNALFFILGFGAVFFLLGLPFTLLGGEHRQTLARVGGVVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATLALGWTPCIGPILGAILTLTAVGGGVGFLLAYILGLAVPFFVVALFADRIKGWLRRAISHYVEVLAGVVLVLVGVLLFTGTFTALN |
6 | 5vkvA | 0.18 | 0.17 | 5.51 | 3.68 | HHsearch | | SLTAAFLAGVLSFLSPLPLVPTYLFYLGGA----RGRPLFNALFFILGFGAVFFLLGLPFTGLLFEHRQTLARVGGVVLVLFGLYMLGLRP-RWGVSLRYEGGAFLLGATLALGWTPC-IGP-ILGAILTLTAVGGGV----GFLLAYILGLVPFFVVALFADRIKGWLRRRISHYVEVLAGVVLVLVGVLLFTGTFTAL- |
7 | 6exsA2 | 0.17 | 0.16 | 5.21 | 1.18 | FFAS-3D | | ---FDLISNTVLVLGVALPIIYFTTMLKDVTDGERSRVKAFIPLFILGMLFWSIQGSNVLNIYTRFGEALFQSINPLFILLFAISMIWLKMGKKQPSLAIK----------FSIGT-LLAGLSYILIGLVGLGYGHTQFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFN--AQMMSVWLLTNASAQAINGTLV-- |
8 | 3vvnA2 | 0.14 | 0.14 | 4.73 | 1.06 | Neff-PPAS | | DILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTLPVFLVLTP-FGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALK |
9 | 4jq6A | 0.14 | 0.12 | 4.08 | 1.18 | FFAS-3D | | DYVGISFWLAAAIM--LASTVFFFVERSDVPVKWKTSLTVAGLVTGVAFWHYLYMRGVWIYA--GETPTVFRYIDWLILQIIEFYLIIAVFWK-----------------------LLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIVGWAIYPIGYAWGYFLNEDALNIVYNLADLINAAFGLAIWAAAMKD-- |
10 | 5vkvA | 0.16 | 0.16 | 5.27 | 1.17 | FFAS-3D | | SLTAAFLAGVLSFLSPLPLVPTYLFYL----GGARGRPLFNALFFILGFGAVFFLLGTLLGGLLFEHRQTLARVGGVVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATLALGWTPCILGAILTLTAVGGGVGFLLAYILGLAVPFFVVALFADRIKGWLRRAGRI-SHYVEVLAGVVLVLVGVLLLNTFFLRIT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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