>PF01824 (331 residues) MEEFQGYLELDKSRQHDFLYPLIFQEYIYALAHDHGLNRSILLKNVGYDNKSSSLIVKRL ITRMYQQNHLIISANDSNQNPFLGHNKNLYSQMISEGFAVIVEIPFSLRLVSSLEGKEIV KSHNLQSIHSIFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFL YEYRNWNSLITPKKSISIFSKRNQRLFLFLYNFHVCEYESIFVFLRNQSSHLRSTSSGVL LERIYFYGKIKHLVEVFANDFQAILWLFKDPFMHYVRYQGKSILASKGTPILMNKWKYYL VNFWQCHFYVWSQPGRIYINQLSNHSLDFLG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEEFQGYLELDKSRQHDFLYPLIFQEYIYALAHDHGLNRSILLKNVGYDNKSSSLIVKRLITRMYQQNHLIISANDSNQNPFLGHNKNLYSQMISEGFAVIVEIPFSLRLVSSLEGKEIVKSHNLQSIHSIFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNSLITPKKSISIFSKRNQRLFLFLYNFHVCEYESIFVFLRNQSSHLRSTSSGVLLERIYFYGKIKHLVEVFANDFQAILWLFKDPFMHYVRYQGKSILASKGTPILMNKWKYYLVNFWQCHFYVWSQPGRIYINQLSNHSLDFLG | |||||||||||||||||||
1 | 5g2xC | 0.18 | 0.15 | 5.01 | 1.87 | SPARKS-K | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNK-GASTKGILDDFSEEKIKKIIQSLKDGTYYYIAKKNSKKMRPLGI-PTFTDKLIQEAVRIILESIYEPVFEDVSHG-----FRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENW---QYHKTYSGTPQGGILSPLLANIYLHELD---------------------------------------KFVLQLKMKFDRESEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
2 | 5g2xC | 0.20 | 0.17 | 5.43 | 1.07 | FFAS-3D | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNYSNKGASTKGILDDDGFSEEKIKKIIQSLKDGTYMYIAKKNSKKMRPLG-IPTFTDKLIQEAVRIILESIY--------EPVFEDVSHGFRSCHTALKTIKREFGGARWFVEGDIKGNIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYS---GTPQGGILSPLLANIYLHELDKFVLQLKMKFDRES---------------------------------PERITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITH-SSQPARFLG | |||||||||||||
3 | 5g2xC | 0.17 | 0.15 | 4.95 | 1.89 | HHpred | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKGA-STKGIADGFSEEKIKKIIQSLKDGTYYPQPVRRKSKMRPLGI-PTFTDKLIQEAVRIILESIYEPVF----E-DVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQ-YHKTYSGTPQ--GGILSPLLANIYLHELDKFVLQLKMKFDR------ESP--E-------------------------RITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSS-QPARFLG | |||||||||||||
4 | 5g2xC | 0.19 | 0.16 | 5.27 | 1.77 | MUSTER | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQN-LYSNKGASTKGILDDFSEEKIKKIIQSLKDGTYYYIAKKNSKKMRPLGI-PTFTDKLIQEAVRIILESIYEPVFEDVSHG-----FRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYS---GTPQGGILSPLLANIYLHELDKFVLQLKMK--------------------------------FDRESP--RITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
5 | 4he8F | 0.10 | 0.09 | 3.21 | 1.12 | CNFpred | --YAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLA-----------------DSYPVMFIGWEGVGLASFLLIGFWYKNPQYADSARKRIGDLGFMLGMAILWGTLSISELKEAMEGPLKNPDLLALAGLLLFLGAVGKSALMVWLPDAMA-GPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAV-AYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWV---ALFHVFTHAFFKALLFLASGSVIHAL-KMGGLWKHLTRWHALIGALALGGLPLLSGFWSKDAILAATLTYP------------------------- | |||||||||||||
6 | 5g2xC | 0.17 | 0.15 | 4.86 | 4.43 | HHsearch-2 | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKG-ASTKGILDGFSEEKIKKIIQSLKDGTYYPQPVRKKSKMRPLGI-PTFTDKLIQEAVRIILESIYEPV----FE-DVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHK-TYSGTPQ--GGILSPLLANIYLHELDKFVLQLKMKFDRE------S-----------------P----------ERITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSS-QPARFLG | |||||||||||||
7 | 5g2xC | 0.18 | 0.15 | 5.03 | 2.09 | Neff-PPAS | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKG-ASTKGILDDFSEEKIKKIIQSLKDGTYMYIAKKNSKKMRPLGI-PTFTDKLIQEAVRIILESIYEPVFEDVSHG-----FRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENW---QYHKTYSGTPQGGILSPLLANIYLHELDKFVLQLKMKFDRE---------------------------------SPERITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
8 | 5g2xC | 0.17 | 0.15 | 4.78 | 4.76 | HHsearch | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKG-ASTKGILDGFSEEKIKKIIQSLKDGTYYPQPVAKKSKMRPLGI-PTFTDKLIQEAVRIILESIYEPVF----E-DVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHK-TYSGTPQ--GGILSPLLANIYLHELDKFVLQLKMKFDRE------S-----------------P----------ERITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSS-QPARFL- | |||||||||||||
9 | 5g2xC | 0.18 | 0.16 | 5.11 | 2.00 | PROSPECTOR2 | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNK-GASTKGILDDFSEEKIKKIIQSLKDGTYYYIAKKNSKKMRPLGIP-TFTDKLIQEAVRIILESIYEPVFEDVSHG-----FRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYS---GTPQGGILSPLLANIYLHELDKFVLQLKMKFDRES--------PE-------------------------RITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
10 | 5g2xC | 0.17 | 0.14 | 4.67 | 1.86 | SAM | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKGA-STKGILDDFSEEKIKKIIQSLKDGTY--MYIAKKNSKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDV-----SHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHK---TYSGTPQGGILSPLLANIYLHELDKFVLQLERITP------------------------------------------EKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |