>PF01770 (422 residues) TWAFPTLILCLYGFFYMMKPSEPFLTPYLTGPDKNLTTDEVTNQILPVWTYSYLALLFPV FLLTDYVRYKPVLLLQGISLIVTWLLLLFAHGVVAMQLVEFFYGTVTATEVAYYAYIYSV VSTQHYQRVTSYCRSVTLVAATAAAVLGQLLVSLGHVSYFYLNAITLASVSLAFLCAFFL PTPQRSMFFHRKDAPEPVPGPAQEPAAGAAHGPGSCQEEPSPDAAARSPQPPAGNARPRR HGLGALLRLGRDLRDCYGSRKLLCWSLWWALATAGFNQVVNYVQVLWDLRAPSHSSAVYN GAVEAIATFLSSVTSFLVQYMKINWDHFGELALGIFSAIDAGCLFLMHFLTNIWACYAGY LIFKVCYMLLLTIATFQIAVNLSMERYALMFGFNNFIALLIQTILTIVVVDSRGLGLDIV TQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TWAFPTLILCLYGFFYMMKPSEPFLTPYLTGPDKNLTTDEVTNQILPVWTYSYLALLFPVFLLTDYVRYKPVLLLQGISLIVTWLLLLFAHGVVAMQLVEFFYGTVTATEVAYYAYIYSVVSTQHYQRVTSYCRSVTLVAATAAAVLGQLLVSLGHVSYFYLNAITLASVSLAFLCAFFLPTPQRSMFFHRKDAPEPVPGPAQEPAAGAAHGPGSCQEEPSPDAAARSPQPPAGNARPRRHGLGALLRLGRDLRDCYGSRKLLCWSLWWALATAGFNQVVNYVQVLWDLRAPSHSSAVYNGAVEAIATFLSSVTSFLVQYMKINWDHFGELALGIFSAIDAGCLFLMHFLTNIWACYAGYLIFKVCYMLLLTIATFQIAVNLSMERYALMFGFNNFIALLIQTILTIVVVDSRGLGLDIVTQ | |||||||||||||||||||
1 | 4zowA | 0.14 | 0.12 | 4.06 | 2.16 | SPARKS-K | QALLFPLCLVLYEFSTYIGNDM--IQPGMLAEQYQAGIDW-VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAGYAAIRESFEEAVCIKITALMANVALIAPLLGPLVGAAWI--HVLPWEGMFVLFAALAAISFFGLQRAMP----------------------------------------------ETATRIGEKLSL------KELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGE--QLSSYEYGLLQVPIFGALIAGNLLLARLTRTVRSLIIMGGWPIMIGLLVAAAATVISSAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSK-GTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFN | |||||||||||||
2 | 3wdoA | 0.11 | 0.09 | 3.32 | 1.83 | FFAS-3D | ---GTVFSLRMLGMFM-VLP----VLTTYGMALQGASEALIG-IAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAV-MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH--KLGLHALFWMIAILATTGIALTIWV----------------------------------------VPNSSTHVLNRESGMVK-------------GSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK---MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTLGVAIGGSLGGWIDGMFD-------- | |||||||||||||
3 | 1pw4A | 0.11 | 0.09 | 3.36 | 1.18 | HHpred | RWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDL-GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGMGPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF-NDWHAALYMAFCAILVALFAFAMMRDTPQSC---GL--------PPIE-------------E----Y---------KN-DTAK----------QIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKH--FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVRGNRGATGVFFMTLVTIATIVYWMNPNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSAIVGYTVDFFGWDG----- | |||||||||||||
4 | 4pypA | 0.14 | 0.13 | 4.46 | 2.23 | MUSTER | TGRLAVGGAVLGSLQFGY-APQKVIEEFYTRYGESILPTTLTTLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKSFEMLILGRFIIGVYCGLTTGFVPMYVGVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVT--------------ILELFRS--PAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQ-QPVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPPAAIAVAGFSNWTSNFIVGMCFEQLCGPYV----- | |||||||||||||
5 | 4zw9A | 0.11 | 0.09 | 3.44 | 1.64 | CNFpred | --TVATIGSFQFGYNTGVINPEKIIKEFITKTLAPPSEVLLTSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKSVEMLILGRLVIGLFCGLCTGVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGT------------------------------DVSQDIQEMKDESARMSQEK-QPIIISIVLQLSQQLSGINAVFYYSTGIFKDAG------QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFQGPRPAAMAVAGCSNWTSNFLVGLLFP------------ | |||||||||||||
6 | 6exsA | 0.09 | 0.09 | 3.26 | 1.11 | HHsearch-2 | GHPRGLGVLFFVEFWERFSYMRAMLIFYMY-FALGIDKTTA-MSIMSVYGALIYMSSIPGAWIADRTGTRGATLLGAVLIIIGHICLSLPFALFGLFSSMFFIIIGSGLKPNISNIVGRLYPENRIDAGFVIFYMSVNLGALISPIILQHFVD--IRNFHGGFLLAAIGMALGLVWYLLFNRKNL----GSVGMAPT--NPLSKE-----EKRKYGMIIGIAIVLVTYYTHTLSFDLISNTVGVPIIYFTTMLR-SKDVTDGRVKAFIPLFFWSIQEQGSNVLNIYGLERMQLNGWTFGEALFQSINPLFILLFAPVISMIWLKMGKKSAIKFSIGTLLAGLSYILIGLVFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFNAQMMSVWLLTNASAQAINGTLVK----LIKPLGQT | |||||||||||||
7 | 4pypA | 0.14 | 0.14 | 4.60 | 2.91 | Neff-PPAS | MLAVGGAVLGSLQFGYNTGAPQKVIEEFYTQSILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKSFEMLILGRFIIGVYCGLTTGFVPYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRN-EENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVT-------------ILELFRS--PAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQ-PVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQG---PRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGP | |||||||||||||
8 | 6exsA | 0.09 | 0.09 | 3.32 | 1.73 | HHsearch | GHPRGLGVLFFVEFWERFSYMRAMLIFYMY-FALGIDKTTA-MSIMSVYGALIYMSSIPGAWIADRTGTRGATLLGAVLIIIGHICLSLPFALFGLFSSMFFIIIGSGLKPNISNIVGRLYPENRIDAGFVIFYMSVNLGALISPIILQHFVD--IRNFHGGFLLAAIGMALGLVWYLLFNRKNL----GSVGMAPT--NPLSKE-----EKRKYGMIIGILVTYYT---HTLSFDLISNTVGVPIIYFTTMLR-SKDVTDGRVKAFIPLLFWSIQEQGSNVLNIYGLERMQLNGWTFGEALFQSINPLFILLFAPVISMIWLKMGKKSAIKFSIGTLLAGLSYILIGLVFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFNAQMMSVWLLTNASAQAINGTLVKP-LGQTNYFIF- | |||||||||||||
9 | 6ei3A | 0.10 | 0.09 | 3.46 | 1.51 | PROSPECTOR2 | PRQIPFIIFSFYGMR-------NILVQFLITSLQEVGAPERDAEAKHILHSFMIGVFFFPLLLADRFFKYTTIIWFSLIYCAGHACLALFEDSRSGGLIAFGAGGIKPLVASFMVDQFDQSNKHRAKVVFDAFYWIINFGSLFASLLIPLALK--HLGPSWAFGIPGILMFIATAVFWLG----RKRYVRVPLPPKDPHGFGAVVRSALLAHAPGQGRPGLALGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVGWEPTSLRRMTSGIAFSGVAWIAVGAIQPMHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVVDNYRPANLYFQ | |||||||||||||
10 | 6exsA | 0.10 | 0.08 | 3.06 | 0.84 | SAM | ----------------------AMLIFYMYFAGLGIDKTTA-MSIMSVYGALIYMSSIPGAWIADRTGTRGATLLGAVLIIIGHICLSLPFALFGLFSSMFFIIIGSGLMPNISNIVGRLYPENRIDAGFVIFYMSVNLGALISPIILQHFVD--IRNFHGGFLLAAIGMALGLVWYLLFNRKNLGSVGMAPTNPLSKEEK-------------------------------------RKYGMTMLRSKDVTDGERSRVKAFIPLFILGMLFWSIQEQGSNVLNIYGLERMQL--NLFGEALFQSINPLFILLFAPVISMIWLKMGKKQPIKFSIGTLLAGLSYILIGLVFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFNAQMMSVWLLTNASAQAINGTLV------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |