>PF01718 (548 residues) MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCVKQHFERAMIAATDAEE PAKAYKLVELAKEAMYDRETVWLQCFKSFSQPYEEDVEGKMKRCGAQLLEDYRKSGMMDE AVKQSALVNSERIRLDDSLSAMPYIYVPINDGQIVNPTFISRYRQIAYYFYNPDAADDWI DPNLFGIRGQHNQIKREVERQINTCPYTGYRGRVFQVMFLPIQLINFLRMDDFAKHFNRY ASMAIQQYLRVGYAEEIRYVQQLFGRVPTGEFPLHQMMLMRRDLPTRDRSIVEARVRRSG DESWQSWLLPMIIIREGLDHQDRWEWFIDYMDRKHTCQLCYLKHSKQIPTCSVIDVRASE LTGCSPFKMVKIEEHVGNDSVFKTKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHH WIRGSGIWNDEGWQEGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWN NLGNFLDIILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACEGGEVIN LAAAMSQM |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCVKQHFERAMIAATDAEEPAKAYKLVELAKEAMYDRETVWLQCFKSFSQPYEEDVEGKMKRCGAQLLEDYRKSGMMDEAVKQSALVNSERIRLDDSLSAMPYIYVPINDGQIVNPTFISRYRQIAYYFYNPDAADDWIDPNLFGIRGQHNQIKREVERQINTCPYTGYRGRVFQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEIRYVQQLFGRVPTGEFPLHQMMLMRRDLPTRDRSIVEARVRRSGDESWQSWLLPMIIIREGLDHQDRWEWFIDYMDRKHTCQLCYLKHSKQIPTCSVIDVRASELTGCSPFKMVKIEEHVGNDSVFKTKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHHWIRGSGIWNDEGWQEGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGNFLDIILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACEGGEVINLAAAMSQM | |||||||||||||||||||
1 | 6n9yA | 0.94 | 0.94 | 26.32 | 4.10 | SPARKS-K | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
2 | 6n9yA | 0.94 | 0.94 | 26.32 | 6.89 | FFAS-3D | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
3 | 6n9yA | 0.94 | 0.94 | 26.32 | 24.60 | HHpred | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
4 | 6n9yA | 0.94 | 0.94 | 26.32 | 3.95 | MUSTER | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
5 | 3w3vA | 0.09 | 0.08 | 3.05 | 1.27 | CNFpred | LPRFLDDG-KDDALASVFESLIELVELA-------PKLF-KDMFDQIIQFTDMVIKNKLEPPARTTALELLTVFSE-GQTLVMVTLIMMTEV-EEVTYDHARQALKRVALKLGGEYLAAPLFQYLQQMSTEWRERFAAMMALSSAAKGCADPKILDVIPLINDPHPRVQYGCCNVLGQISTKSPFIQRTAHDRILPALISKLTS-------CTSRVQTHAAAALVNFSEFA-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLLL-----NSVLKGKCM----------ECATLIGFAVGKEKEHSQELISILV-RSYLEQSWSRICDFVPLLPIVIPPLLITAKAT--QDVGLIEEEEAANFQQYP---DWDVVQVQGKHIAIHTSDDKVSAMELLQSYATLLRGQ---FAVYVKEVMEEIALPSLDFYLHDGVRAAGATLIPILLSCLL--------LVLLWHKASSKLIGGL--MSEPMPEITQVYHNSLVNGIKVMG----------DNCLSEDQLAAFTKGVSAN | |||||||||||||
6 | 6n9yA | 0.94 | 0.94 | 26.32 | 5.71 | HHsearch-2 | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
7 | 6n9yA | 0.94 | 0.94 | 26.32 | 7.72 | Neff-PPAS | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
8 | 6n9yA | 0.94 | 0.94 | 26.27 | 9.14 | HHsearch | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQ- | |||||||||||||
9 | 5mqfM | 0.08 | 0.07 | 2.91 | 1.22 | PROSPECTOR2 | FSRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWY------RYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEY---------------------------LKSSDRLDEADERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAII---RGGLTRFTDQLGKLWCSLADYYIREAIRTVMTVRDFTQVFDSYFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVLDDARVILEKATKVNFKQVDDLALRHEALPARRAEYFDGSEPVQNRVYKSLKVWSMDRILDLRIATPQIVFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGCPPKYAKTLYLLYAQLERATRAVEPAQQYDMFNIYIKRATHTRGIYQKAIEVLSDEHAICDPRTTGAFWQTWKDFEVRH | |||||||||||||
10 | 6n9yA | 0.94 | 0.94 | 26.32 | 8.21 | SAM | MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |