Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DSHTKEIDLINRDPKQINEDVIKVDFEDVIAEPDGTHSLDGVWKVSYTTFTVSKYWCYRVLSAIFGIPMALIWGFLFACISFCHVWAVVPCIKSYMIEIQCVSRIYSLCIQTFCNPFFEALGKVFSSIRVAL |
1 | 5cwjA | 0.08 | 0.08 | 3.05 | 0.87 | SPARKS-K | | EEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESALRQAIRAVAEIAKESEVLEEAIRVILRIAKESALRQAIRAVAEIAKEVLEEAIRVIRQIAEESARRQAERAEEEI |
2 | 4ryiA | 0.09 | 0.08 | 2.85 | 0.80 | FFAS-3D | | -------------------------WYDALEKPSWTPPIGMIWAVLFGLIALSVAIIYNWFLFLLNYIFNQAFSYFQLFLATVDCLLVAITTLLLIMFSSNLSKVSAWLLIPYFLWSAFATYLSWTIYSIN- |
3 | 5doqA1 | 0.12 | 0.05 | 1.89 | 0.21 | HHpred | | ------------------------------------------------------------AGQVISLPLFMETFAFFFEAIFLGIYLYTNQKHLLLLIPVAIGSSASAMFITMVNAFMNT------------ |
4 | 1qgkA2 | 0.06 | 0.06 | 2.58 | 0.77 | MUSTER | | --TSKFY------AKGALQYLVPILTQTLTKQDENDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMVVVRDTAAWTVGRICELLPEAA |
5 | 3rkoB | 0.10 | 0.07 | 2.55 | 0.80 | CNFpred | | --------------------------------------IARTHGLFLMTPEVLHLVGVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQ |
6 | 3s1sA3 | 0.17 | 0.08 | 2.48 | 0.57 | HHsearch-2 | | EVPTRDAIYFKSRPGRLLEEGRKIDFNVLFSEPEPNTNDNDIWNVNLLLNDLGRRILT-------------------------------------------------------------------------- |
7 | 1qgkA2 | 0.08 | 0.07 | 2.74 | 0.86 | Neff-PPAS | | -------------AKGALQYLVPILTQTLTKQDENDDCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL |
8 | 3s1sA3 | 0.17 | 0.08 | 2.48 | 0.54 | HHsearch | | EVPTRDAIYFKSRPGRLLEEGRKIDFNVLFSEPEPNTNDNDIWNVNLLLNDLGRRILT-------------------------------------------------------------------------- |
9 | 6eunA | 0.11 | 0.11 | 3.82 | 0.79 | SP3 | | NGFKAGETIYDIDEDG-TITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQNVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFAEETKTNIVKIDEKLEAASKH----- |
10 | 2iu5A | 0.06 | 0.05 | 2.36 | 0.62 | PROSPECTOR2 | | M---------EKSIIKIRSWIFENDFAELINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKSDLEKSFICRYNAAAICAITRESIIRGYSQIVNLLLAQIKIFE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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